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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank81Aligned Residues242
% Identity25%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210..... ....220.........230.........240.........250.........260.........270
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Query Sequence  KELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCPENIKKEICINKMLNHENVVKFYGHR. REGNIQYLFLEYCS
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T
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   7..10.........20.........30.........40.........50.........60.........70. ........80.....
 
   271........280.........290.........300.........310.........320.........330....... ..340.....
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Query Sequence  KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK. . . . . EASSTQDT
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Template Sequence  GGELFDRIEPDIG. . MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK
Template Known Secondary structure  TGGGGSBTTTB..

TT
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SGGG
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   8990.........100. ........110.........120.........130.........140.........150.........160......
 
   346...350.........360... ......370.........380.........390......... 400.........410.........420..
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Query Sequence  GKLPVKWTAPEALREKKF. STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV. . EKGYKMDAPDGCPPAVYEVMKNC
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Template Sequence  MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
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GGGS

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   167..170.........180.........190.........200... ......210.........220.........230.........240.....
 
   423......430........
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Query Sequence  WHLDAAMRPSFLQLRE
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Template Sequence  LVENPSARITIPDIKK
Template Known Secondary structure  S
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   246...250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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