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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank67Aligned Residues234
% Identity24%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210..... ....220..... ....230.........240.........250.........
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Query Sequence  GWALNMKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIK. . . . . NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF. HDA
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G..GG
SSTTT

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TT


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   127..130 .........140.........150.........160.........170.........180.........190.........200 ...
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA
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Template Sequence  TRVYLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . .
Template Known Secondary structure  S


TT
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TTT




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   204.....210.........220....... ..230.........240.........250.........260.........270........
 
   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM
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Template Sequence  . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGARDLI
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GGG

GGGTTTTSSGGG.SS
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   279280.........290.........300.........310.. .......320.........330... ......340........
 
   420.........430........
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Query Sequence  KNCWHLDAAMRPSFLQLRE
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Template Sequence  SRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   361........370.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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