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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank26Aligned Residues249
% Identity24%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210..... ....220.... .....230.........240.........250........
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Query Sequence  SGWALNMKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCI. . . . . KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE
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Template Sequence  ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY. ET
Template Known Secondary structure  TS


GGGTTTTT

TT



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   177..180.........190.........200.........210.........220.........230.........240.........250... ..
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE
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Template Sequence  KDALCLVLTLMNGGDLKFHIYHMAG. . FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH
Template Known Secondary structure  SS



S
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SGGG
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   256...260.........270.........280 .........290.........300.........310.........320.........330...
 
   339340. ........350.........360.........370.........380.........390.........400.........410......
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Query Sequence  ASS. . TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY
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Template Sequence  VPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFSPQAR
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GGG

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   336...340.........350.........360.........370.........380 .........390.........400.........410....
 
   417..420.........430 ........
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Query Sequence  EVMKNCWHLDAAMR. . . . . PSFLQLRE
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Template Sequence  SLCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
SSGGGSTTSSSSTT
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   418.420.........430.........440....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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