Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank37Aligned Residues246
% Identity22%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210..... ....220.........230.. .......240.........250........
Predicted Secondary structure 










..





........





Query SS confidence 


























. .
















. . . . . . . .

























Query Sequence  ALNMKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDATAQA. . . . . . . . FLAEASVMTQLRHSNLVQLLGVIVEE
Query Conservation 

      
   

 
 

 
      ..   



          ........
  
   
  
 




 
 
     
Alig confidence 


























..
















........






















.

Template Conservation       

     

 
 

 

      

   


 
 
              
      
    

 

 
    .  
Template Sequence  HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF. HT
Template Known Secondary structure 


GGG
SSSTTT

TTSSS

SSB

.
Template Predicted Secondary structure 























.
Template SS confidence 















































































   185....190.........200.........210.........220.........230.........240.........250.........260. ..
 
   259260.........270.........280.........290.........300.........310.........320.........330........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE
Query Conservation     
 

 
    
 
   
       
          


 

 


    

 

   


       

 




  
Alig confidence 
























..




















































Template Conservation       



   

 
   
     ..
 
        

   
  

   







 



     


 


 
  
Template Sequence  PDKLSFILDLMNGGDLHYHLSQHGV. . FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD
Template Known Secondary structure  TT


S
B
S..

TT




GGG
TTS



TT
Template Predicted Secondary structure 










..



















Template SS confidence 















































































   264.....270.........280........ .290.........300.........310.........320.........330.........340.
 
   339340..... ....350.........360.. .......370.........380......... 390.........400.........410....
Predicted Secondary structure 






.






.









..













Query SS confidence 






.
















.


























. .
























Query Sequence  ASSTQDT. GKLPVKWTAPEALREKK. FSTKSDVWSFGILLWEIYSFGRVPYPR. . IPLKDVVPRVEKGYKMDAPDGCPPA
Query Conservation         .        


      . 
 








 
 

 
 
  

  ..    

   
  
 
   
   
  
Alig confidence 






.
















.


















.






..
























Template Conservation            

  
 


            
 



 





 .
  

                      
   
  
Template Sequence  FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE
Template Known Secondary structure 
SS






S
TTS

SSS



T.SS
SS
SS
SS
T





TTS
Template Predicted Secondary structure 



















.























Template SS confidence 















































































   342.......350.........360.........370.........380...... ...390.........400.........410.........420
 
   415....420.........430. .......
Predicted Secondary structure 





.....
Query SS confidence 
















. . . . .






Query Sequence  VYEVMKNCWHLDAAMRP. . . . . SFLQLRE
Query Conservation 
  

  
   

  

.....
   
  
Alig confidence 
















.....






Template Conservation     

  

  

  


        
  
Template Sequence  LRSLLEGLLQRDVNRRLGCLGRGAQEVKE
Template Known Secondary structure 

SSSTTSTTTSSSS
Template Predicted Secondary structure 












Template SS confidence 




























   421........430.........440.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions