Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 40 Aligned Residues 243 % Identity 23% Template c1koaA_ PDB info PDB header:kinase Chain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (c.elegans), autoregulated protein2 kinase and immunoglobulin domains Resolution 3.30 Å

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																		.	.
Query SS confidence																									.	.																		.	.
Query Sequence		K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	R	.	.	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	.	.	F	L	A	E	A	S	V	M	T	Q	L	R	H	S	N	L	V	Q	L	L	G	V	I	V	E	E	K	G	G	L	Y	I	V	T	E	Y
Query Conservation																									.	.																		.	.
Alig confidence																									.	.																		.	.																								.
Template Conservation																																																																					.
Template Sequence		D	H	Y	D	I	H	E	E	L	G	T	G	A	F	G	V	V	H	R	V	T	E	R	A	T	G	N	N	F	A	A	K	F	V	M	T	P	H	E	S	D	K	E	T	V	R	K	E	I	Q	T	M	S	V	L	R	H	P	T	L	V	N	L	H	D	A	F	.	E	D	D	N	E	M	V	M	I	Y	E	F
Template Known Secondary structure		G	T											T	T									T	T	T	T												S																	T			T	T	B								.			T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		5940	.	.	.	.	.	.	.	.	.	5950	.	.	.	.	.	.	.	.	.	5960	.	.	.	.	.	.	.	.	.	5970	.	.	.	.	.	.	.	.	.	5980	.	.	.	.	.	.	.	.	.	5990	.	.	.	.	.	.	.	.	.	6000	.	.	.	.	.	.		.	.	.	6010	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.
Predicted Secondary structure																																																											.	.													.	.
Query SS confidence																																																											.	.													.	.
Query Sequence		M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D	.	.	N	V	A	K	V	S	D	F	G	L	T	K	.	.	E	A	S	S	T	Q	D
Query Conservation																																																											.	.													.	.
Alig confidence																		.																																									.	.													.	.
Template Conservation																		.
Template Sequence		M	S	G	G	E	L	F	E	K	V	A	D	E	H	N	K	.	M	S	E	D	E	A	V	E	Y	M	R	Q	V	C	K	G	L	C	H	M	H	E	N	N	Y	V	H	L	D	L	K	P	E	N	I	M	F	T	T	K	R	S	N	E	L	K	L	I	D	F	G	L	T	A	H	L	D	P	K	Q	S	V	K
Template Known Secondary structure				S		B						T		T	T	S		.	B																						T	T								G	G	G				S	S	T	T	S									T	T						T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		6019	6020	.	.	.	.	.	.	.	.	.	6030	.	.	.	.		.	.	.	.	.	6040	.	.	.	.	.	.	.	.	.	6050	.	.	.	.	.	.	.	.	.	6060	.	.	.	.	.	.	.	.	.	6070	.	.	.	.	.	.	.	.	.	6080	.	.	.	.	.	.	.	.	.	6090	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	K	G	Y	K	M	D	A	P	D	G	C	.	.	.	P	P	A	V	Y	E	V	M	K	N
Query Conservation																																																																					.	.	.
Alig confidence																																							.																														.	.	.
Template Conservation																																							.
Template Sequence		V	T	T	G	T	A	E	F	A	A	P	E	V	A	E	G	K	P	V	G	Y	Y	T	D	M	W	S	V	G	V	L	S	Y	I	L	L	S	.	G	L	S	P	F	G	G	E	N	D	D	E	T	L	R	N	V	K	S	C	D	W	N	M	D	D	S	A	F	S	G	I	S	E	D	G	K	D	F	I	R	K
Template Known Secondary structure					S		T	T	T								T			B																			.	S	S		S	S			S	S											T				S			G	G	G	G	G
Template Predicted Secondary structure																																							.
Template SS confidence
		6098	.	6100	.	.	.	.	.	.	.	.	.	6110	.	.	.	.	.	.	.	.	.	6120	.	.	.	.	.	.	.	.	.	6130	.	.	.	.		.	.	.	.	.	6140	.	.	.	.	.	.	.	.	.	6150	.	.	.	.	.	.	.	.	.	6160	.	.	.	.	.	.	.	.	.	6170	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	H	L	D	A	A	M	R	P	S	F	L	Q	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	L	A	D	P	N	T	R	M	T	I	H	Q	A	L	E
Template Known Secondary structure					S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		6177	.	.	6180	.	.	.	.	.	.	.	.	.	6190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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