Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJW6
Confidence17.14%DateFri May 25 09:28:59 BST 2012
Rank11Aligned Residues60
% Identity17%Templatec3k44D_
PDB info PDB header:nucleic acid binding proteinChain: D: PDB Molecule:purine-rich binding protein-alpha, isoform b; PDBTitle: crystal structure of drosophila melanogaster pur-alpha
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150........ .160.........170.........180. .....
Predicted Secondary structure 








..................








..




Query SS confidence 































. . . . . . . . . . . . . . . . . .






















. .




Query Sequence  RAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMA. . . . . . . . . . . . . . . . . . HRGEVPAMLPLKVKGRRFYFLLD. . KTGHF
Query Conservation   



 
 
 

 


  
 




  

   .................. 
    
 






  





..
 
 
Alig confidence 































..................






















..




Template Conservation 
 

 






   
 
  
  
      
 
 
    
    
      
     
  
    
    

  
 



Template Sequence  NRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPNNLPEGKLKSEMMIKDYRRYYLDLKENARGRF
Template Known Secondary structure  TT
TT


S
S







STTTT
Template Predicted Secondary structure 




























Template SS confidence 















































































   63......70.........80.........90.........100.........110.........120.........130.........140..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions