Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJW6
Confidence14.80%DateFri May 25 09:28:59 BST 2012
Rank16Aligned Residues48
% Identity8%Templatec1yycA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative late embryogenesis abundant protein; PDBTitle: solution structure of a putative late embryogenesis2 abundant (lea) protein at2g46140.1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160.........170.... .....180.........190....
Predicted Secondary structure 







.........








Query SS confidence 



























. . . . . . . . .



















Query Sequence  FTVPLKQVSCMAHRGEVPAMLPLKVKGR. . . . . . . . . RFYFLLDKTGHFPNTKLFDN
Query Conservation 




  

    
    
 






 ......... 






 
 
 

 


 
Alig confidence 



























.........



















Template Conservation 
 
    
  

  
     
 
 
 
 
 
  

 
  


 

 
   

 
 
 
Template Sequence  VKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDF
Template Known Secondary structure  ST




SS

TTSS


TTSS
Template Predicted Secondary structure 





















Template SS confidence 
























































   117..120.........130.........140.........150.........160.........170...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions