Phyre 2 alignment of A0PJW6 with d1sgua_

Return to main results | Retrieve Phyre Job Id

Job Description | A0PJW6
Confidence | 8.53% | Date | Fri May 25 09:28:59 BST 2012
Rank | 50 | Aligned Residues | 17
% Identity | 29% | Template | d1sgua_
SCOP info | Acid proteases | Acid proteases | Retroviral protease (retropepsin)
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | L | P | L | K | V | K | G | R | R | F | Y | F | L | L | D | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | T | I | K | I | G | G | Q | L | R | E | A | L | L | D | T
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions