Phyre 2 Results for A0PJW6

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Email | l.a.kelley@imperial.ac.uk
Description | A0PJW6
Date | Fri May 25 09:28:59 BST 2012
Unique Job ID | 2896c7f53cbc3de2

Summary |

Top model
Image coloured by rainbow N → C terminus
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Model (left) based on template d1gtra1
Top template information
Fold:Ribosomal protein L25-like Superfamily:Ribosomal protein L25-like Family:Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
Confidence and coverage
Confidence: | 31.4% | Coverage: | 12%
25 residues ( 12% of your sequence) have been modelled with 31.4% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | A | A | P | W | R | R | W | P | T | G | L | L | A | V | L | R | P | L | L | T | C | R | P | L | Q | G | T | T | L | Q | R | D | V | L | L | F | E | H | D | R | G | R | F | F | T | I | L | G | L | F | C | A | G | Q | G | V | F | W | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | S | M | A | V | A | A | V | S | R | P | P | V | P | V | Q | P | L | D | A | E | V | P | N | R | G | P | F | D | L | R | S | A | L | W | R | Y | G | L | A | V | G | C | G | A | I | G | A | L | V | L | G | A | G | L | L | F | S | L | R | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | V | R | S | V | V | L | R | A | G | G | Q | Q | V | T | L | T | T | H | A | P | F | G | L | G | A | H | F | T | V | P | L | K | Q | V | S | C | M | A | H | R | G | E | V | P | A | M | L | P | L | K | V | K | G | R | R | F | Y | F | L | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | .
Sequence |  | D | K | T | G | H | F | P | N | T | K | L | F | D | N | T | V | G | A | Y | R | S | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d1gtra1 |

### PDB 1gtr chain A domain 1

Region: 177 - 201
Aligned: 25
Modelled: 25
Confidence: 31.4%
Identity: 32%
Fold: Ribosomal protein L25-like
Superfamily: Ribosomal protein L25-like
Family: Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain

Phyre2
2 |
| d1sr8a_ |

### PDB 1sr8 chain A

Region: 86 - 156
Aligned: 58
Modelled: 71
Confidence: 23.1%
Identity: 21%
Fold: CbiD-like
Superfamily: CbiD-like
Family: CbiD-like

Phyre2
3 |
| d2zcta1 |

### PDB 2zct chain A domain 1

Region: 178 - 197
Aligned: 20
Modelled: 20
Confidence: 21.3%
Identity: 20%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Glutathione peroxidase-like

Phyre2
4 |
| d1z5ye1 |

### PDB 1z5y chain E domain 1

Region: 171 - 186
Aligned: 16
Modelled: 16
Confidence: 19.6%
Identity: 38%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Glutathione peroxidase-like

Phyre2
5 |
| d2v3ia1 |

### PDB 2v3i chain A domain 1

Region: 122 - 156
Aligned: 33
Modelled: 35
Confidence: 19.5%
Identity: 24%
Fold: Concanavalin A-like lectins/glucanases
Superfamily: Concanavalin A-like lectins/glucanases
Family: Glycosyl hydrolase family 7 catalytic core

Phyre2
6 |
| d1gpia_ |

### PDB 1gpi chain A

Region: 122 - 156
Aligned: 33
Modelled: 35
Confidence: 19.5%
Identity: 18%
Fold: Concanavalin A-like lectins/glucanases
Superfamily: Concanavalin A-like lectins/glucanases
Family: Glycosyl hydrolase family 7 catalytic core

Phyre2
7 |
| d1k3ia1 |

### PDB 1k3i chain A domain 1

Region: 120 - 184
Aligned: 61
Modelled: 65
Confidence: 19.4%
Identity: 20%
Fold: Immunoglobulin-like beta-sandwich
Superfamily: E set domains
Family: E-set domains of sugar-utilizing enzymes

Phyre2
8 |
| c2rfyB_ |

### PDB 2rfy chain B

Region: 122 - 156
Aligned: 33
Modelled: 35
Confidence: 18.9%
Identity: 24%
PDB header:hydrolase
Chain: B: PDB Molecule:cellulose 1,4-beta-cellobiosidase;
PDBTitle: crystal structure of cellobiohydrolase from melanocarpus2 albomyces complexed with cellobiose

Phyre2
9 |
| d1q9ha_ |

### PDB 1q9h chain A

Region: 122 - 156
Aligned: 33
Modelled: 35
Confidence: 18.9%
Identity: 15%
Fold: Concanavalin A-like lectins/glucanases
Superfamily: Concanavalin A-like lectins/glucanases
Family: Glycosyl hydrolase family 7 catalytic core

Phyre2
10 |
| c1exdA_ |

### PDB 1exd chain A

Region: 177 - 201
Aligned: 25
Modelled: 25
Confidence: 17.6%
Identity: 32%
PDB header:ligase/rna
Chain: A: PDB Molecule:glutaminyl-trna synthetase;
PDBTitle: crystal structure of a tight-binding glutamine trna bound2 to glutamine aminoacyl trna synthetase

Phyre2
11 |
| c3k44D_ |

### PDB 3k44 chain D

Region: 127 - 186
Aligned: 60
Modelled: 60
Confidence: 17.1%
Identity: 17%
PDB header:nucleic acid binding protein
Chain: D: PDB Molecule:purine-rich binding protein-alpha, isoform b;
PDBTitle: crystal structure of drosophila melanogaster pur-alpha

Phyre2
12 |
| c3ia1A_ |

### PDB 3ia1 chain A

Region: 171 - 186
Aligned: 16
Modelled: 16
Confidence: 16.7%
Identity: 31%
PDB header:oxidoreductase
Chain: A: PDB Molecule:thio-disulfide isomerase/thioredoxin;
PDBTitle: crystal structure of thio-disulfide isomerase from thermus2 thermophilus

Phyre2
13 |
| d2b5xa1 |

### PDB 2b5x chain A domain 1

Region: 171 - 186
Aligned: 16
Modelled: 16
Confidence: 16.7%
Identity: 31%
Fold: Thioredoxin fold
Superfamily: Thioredoxin-like
Family: Glutathione peroxidase-like

Phyre2
14 |
| c3fkfC_ |

### PDB 3fkf chain C

Region: 171 - 186
Aligned: 16
Modelled: 16
Confidence: 16.5%
Identity: 25%
PDB header:oxidoreductase
Chain: C: PDB Molecule:thiol-disulfide oxidoreductase;
PDBTitle: thiol-disulfide oxidoreductase from bacteroides fragilis nctc 9343

Phyre2
15 |
| c3razA_ |

### PDB 3raz chain A

Region: 171 - 186
Aligned: 16
Modelled: 16
Confidence: 14.9%
Identity: 13%
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin-related protein;
PDBTitle: the crystal structure of thioredoxin-related protein from neisseria2 meningitidis serogroup b

Phyre2
16 |
| c1yycA_ |

### PDB 1yyc chain A

Region: 147 - 194
Aligned: 48
Modelled: 48
Confidence: 14.8%
Identity: 8%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative late embryogenesis abundant protein;
PDBTitle: solution structure of a putative late embryogenesis2 abundant (lea) protein at2g46140.1

Phyre2
17 |
| c3ewlA_ |

### PDB 3ewl chain A

Region: 171 - 186
Aligned: 16
Modelled: 16
Confidence: 14.2%
Identity: 19%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized conserved protein bf1870;
PDBTitle: crystal structure of conserved protein bf1870 of unknown function from2 bacteroides fragilis

Phyre2
18 |
| d2e9xb2 |

### PDB 2e9x chain B domain 2

Region: 137 - 151
Aligned: 15
Modelled: 15
Confidence: 13.4%
Identity: 40%
Fold: GINS/PriA/YqbF domain
Superfamily: PriA/YqbF domain
Family: PSF2 N-terminal domain-like

Phyre2
19 |
| c2l5oA_ |

### PDB 2l5o chain A

Region: 171 - 186
Aligned: 16
Modelled: 16
Confidence: 12.7%
Identity: 19%
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative thioredoxin;
PDBTitle: solution structure of a putative thioredoxin from neisseria2 meningitidis

Phyre2
20 |
| c3eytA_ |

### PDB 3eyt chain A

Region: 171 - 186
Aligned: 16
Modelled: 15
Confidence: 12.6%
Identity: 31%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein spoa0173;
PDBTitle: crystal structure of thioredoxin-like superfamily protein spoa0173

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1gtra1 |
|  | 31.4 | 32 | Fold:Ribosomal protein L25-like Superfamily:Ribosomal protein L25-like Family:Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
2 | d1sr8a_ |
|  | 23.1 | 21 | Fold:CbiD-like Superfamily:CbiD-like Family:CbiD-like
3 | d2zcta1 |
|  | 21.3 | 20 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
4 | d1z5ye1 |
|  | 19.6 | 38 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
5 | d2v3ia1 |
|  | 19.5 | 24 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolase family 7 catalytic core
6 | d1gpia_ |
|  | 19.5 | 18 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolase family 7 catalytic core
7 | d1k3ia1 |
|  | 19.4 | 20 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes
8 | c2rfyB_ |
|  | 18.9 | 24 | PDB header:hydrolase Chain: B: PDB Molecule:cellulose 1,4-beta-cellobiosidase; PDBTitle: crystal structure of cellobiohydrolase from melanocarpus2 albomyces complexed with cellobiose
9 | d1q9ha_ |
|  | 18.9 | 15 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolase family 7 catalytic core
10 | c1exdA_ |
|  | 17.6 | 32 | PDB header:ligase/rna Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of a tight-binding glutamine trna bound2 to glutamine aminoacyl trna synthetase
11 | c3k44D_ |
|  | 17.1 | 17 | PDB header:nucleic acid binding protein Chain: D: PDB Molecule:purine-rich binding protein-alpha, isoform b; PDBTitle: crystal structure of drosophila melanogaster pur-alpha
12 | c3ia1A_ |
|  | 16.7 | 31 | PDB header:oxidoreductase Chain: A: PDB Molecule:thio-disulfide isomerase/thioredoxin; PDBTitle: crystal structure of thio-disulfide isomerase from thermus2 thermophilus
13 | d2b5xa1 |
|  | 16.7 | 31 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
14 | c3fkfC_ |
|  | 16.5 | 25 | PDB header:oxidoreductase Chain: C: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: thiol-disulfide oxidoreductase from bacteroides fragilis nctc 9343
15 | c3razA_ |
|  | 14.9 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-related protein; PDBTitle: the crystal structure of thioredoxin-related protein from neisseria2 meningitidis serogroup b
16 | c1yycA_ |
|  | 14.8 | 8 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative late embryogenesis abundant protein; PDBTitle: solution structure of a putative late embryogenesis2 abundant (lea) protein at2g46140.1
17 | c3ewlA_ |
|  | 14.2 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein bf1870; PDBTitle: crystal structure of conserved protein bf1870 of unknown function from2 bacteroides fragilis
18 | d2e9xb2 |
|  | 13.4 | 40 | Fold:GINS/PriA/YqbF domain Superfamily:PriA/YqbF domain Family:PSF2 N-terminal domain-like
19 | c2l5oA_ |
|  | 12.7 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: solution structure of a putative thioredoxin from neisseria2 meningitidis
20 | c3eytA_ |
|  | 12.6 | 31 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein spoa0173; PDBTitle: crystal structure of thioredoxin-like superfamily protein spoa0173
21 | d1hdfa_ |
| not modelled | 12.6 | 23 | Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Crystallins/Ca-binding development proteins
22 | c2hz7A_ |
| not modelled | 12.2 | 17 | PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans
23 | d1gefa_ |
| not modelled | 12.1 | 14 | Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like
24 | c3eurA_ |
| not modelled | 12.0 | 25 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the c-terminal domain of uncharacterized protein2 from bacteroides fragilis nctc 9343
25 | d1knga_ |
| not modelled | 12.0 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
26 | d2fy6a1 |
| not modelled | 11.9 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
27 | c2lrtA_ |
| not modelled | 11.7 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of the uncharacterized thioredoxin-like protein2 bvu_1432 from bacteroides vulgatus
28 | c3hdcA_ |
| not modelled | 11.5 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin family protein; PDBTitle: the crystal structure of thioredoxin protein from geobacter2 metallireducens
29 | c3kh7A_ |
| not modelled | 11.4 | 38 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of the periplasmic soluble domain of reduced ccmg2 from pseudomonas aeruginosa
30 | d1rutx4 |
| not modelled | 11.3 | 44 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain
31 | d1hvca_ |
| not modelled | 11.0 | 29 | Fold:Acid proteases Superfamily:Acid proteases Family:Retroviral protease (retropepsin)
32 | c2lrnA_ |
| not modelled | 10.9 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein; PDBTitle: solution structure of a thiol:disulfide interchange protein from2 bacteroides sp.
33 | d1eg1a_ |
| not modelled | 10.7 | 18 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolase family 7 catalytic core
34 | d1u2ma_ |
| not modelled | 10.7 | 17 | Fold:OmpH-like Superfamily:OmpH-like Family:OmpH-like
35 | d1qmva_ |
| not modelled | 10.7 | 30 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
36 | c1uv7A_ |
| not modelled | 10.6 | 36 | PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae
37 | d1uv7a_ |
| not modelled | 10.6 | 36 | Fold:RRF/tRNA synthetase additional domain-like Superfamily:General secretion pathway protein M, EpsM Family:General secretion pathway protein M, EpsM
38 | c3ztlB_ |
| not modelled | 10.6 | 30 | PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin peroxidase; PDBTitle: crystal structure of decameric form of peroxiredoxin i from2 schistosoma mansoni
39 | d1n8ja_ |
| not modelled | 10.1 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
40 | c3kv1A_ |
| not modelled | 9.8 | 15 | PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri
41 | c3kcmC_ |
| not modelled | 9.7 | 25 | PDB header:oxidoreductase Chain: C: PDB Molecule:thioredoxin family protein; PDBTitle: the crystal structure of thioredoxin protein from geobacter2 metallireducens
42 | c4evmA_ |
| not modelled | 9.3 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin family protein; PDBTitle: 1.5 angstrom crystal structure of soluble domain of membrane-anchored2 thioredoxin family protein from streptococcus pneumoniae strain3 canada mdr_19a
43 | c3or5A_ |
| not modelled | 9.1 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein, thioredoxin family PDBTitle: crystal structure of thiol:disulfide interchange protein, thioredoxin2 family protein from chlorobium tepidum tls
44 | d2owna2 |
| not modelled | 9.1 | 36 | Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:Acyl-ACP thioesterase-like
45 | d1ib8a1 |
| not modelled | 9.1 | 11 | Fold:Sm-like fold Superfamily:YhbC-like, C-terminal domain Family:YhbC-like, C-terminal domain
46 | d1zzoa1 |
| not modelled | 8.9 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
47 | c2ls5A_ |
| not modelled | 8.9 | 28 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of a putative protein disulfide isomerase from2 bacteroides thetaiotaomicron
48 | c3hn5B_ |
| not modelled | 8.8 | 22 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative exported protein bf0290; PDBTitle: crystal structure of bf0290 (yp_210027.1) from bacteroides fragilis2 nctc 9343 at 1.70 a resolution
49 | c2xdhA_ |
| not modelled | 8.7 | 36 | PDB header:cell adhesion Chain: A: PDB Molecule:cohesin; PDBTitle: non-cellulosomal cohesin from the hyperthermophilic2 archaeon archaeoglobus fulgidus
50 | d1sgua_ |
| not modelled | 8.5 | 29 | Fold:Acid proteases Superfamily:Acid proteases Family:Retroviral protease (retropepsin)
51 | c3erwG_ |
| not modelled | 8.5 | 25 | PDB header:oxidoreductase Chain: G: PDB Molecule:sporulation thiol-disulfide oxidoreductase a; PDBTitle: crystal structure of stoa from bacillus subtilis
52 | d1ojja_ |
| not modelled | 8.4 | 18 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolase family 7 catalytic core
53 | d1xo8a_ |
| not modelled | 8.4 | 11 | Fold:Immunoglobulin-like beta-sandwich Superfamily:LEA14-like Family:LEA14-like
54 | d2essa2 |
| not modelled | 7.9 | 20 | Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:Acyl-ACP thioesterase-like
55 | c3ha9A_ |
| not modelled | 7.9 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized thioredoxin-like protein; PDBTitle: the 1.7a crystal structure of a thioredoxin-like protein from2 aeropyrum pernix
56 | c3ohnA_ |
| not modelled | 7.7 | 18 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane usher protein fimd; PDBTitle: crystal structure of the fimd translocation domain
57 | d1prxa_ |
| not modelled | 7.6 | 20 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
58 | d1lu4a_ |
| not modelled | 7.6 | 13 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
59 | d1xcca_ |
| not modelled | 7.5 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
60 | c2v2gC_ |
| not modelled | 7.4 | 20 | PDB header:oxidoreductase Chain: C: PDB Molecule:peroxiredoxin 6; PDBTitle: crystal structure of the c45s mutant of the peroxiredoxin 62 of arenicola marina. monoclinic form
61 | c3cmiA_ |
| not modelled | 7.3 | 50 | PDB header:oxidoreductase Chain: A: PDB Molecule:peroxiredoxin hyr1; PDBTitle: crystal structure of glutathione-dependent phospholipid peroxidase2 hyr1 from the yeast saccharomyces cerevisiae
62 | c3lorB_ |
| not modelled | 7.3 | 25 | PDB header:isomerase Chain: B: PDB Molecule:thiol-disulfide isomerase and thioredoxins; PDBTitle: the crystal structure of a thiol-disulfide isomerase from2 corynebacterium glutamicum to 2.2a
63 | c3fw2A_ |
| not modelled | 7.2 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: c-terminal domain of putative thiol-disulfide oxidoreductase from2 bacteroides thetaiotaomicron.
64 | c2lcmA_ |
| not modelled | 7.2 | 57 | PDB header:membrane protein Chain: A: PDB Molecule:voltage-dependent n-type calcium channel subunit alpha-1b; PDBTitle: nmr structure of s3-4 peptide
65 | c2ownA_ |
| not modelled | 7.1 | 36 | PDB header:hydrolase Chain: A: PDB Molecule:putative oleoyl-[acyl-carrier protein] thioesterase; PDBTitle: crystal structure of oleoyl thioesterase (putative) (np_784467.1) from2 lactobacillus plantarum at 2.00 a resolution
66 | d1uula_ |
| not modelled | 7.0 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
67 | d1jfua_ |
| not modelled | 7.0 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
68 | d1st9a_ |
| not modelled | 7.0 | 25 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
69 | c2zt9E_ |
| not modelled | 6.9 | 53 | PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120
70 | c3gf6B_ |
| not modelled | 6.8 | 22 | PDB header:unknown function Chain: B: PDB Molecule:uncharacterized bacterial lipoprotein; PDBTitle: crystal structure of a bacterial lipoprotein (bt_1233) from2 bacteroides thetaiotaomicron vpi-5482 at 1.69 a resolution
71 | c3lwaA_ |
| not modelled | 6.5 | 19 | PDB header:isomerase Chain: A: PDB Molecule:secreted thiol-disulfide isomerase; PDBTitle: the crystal structure of a secreted thiol-disulfide2 isomerase from corynebacterium glutamicum to 1.75a
72 | d3efba1 |
| not modelled | 6.4 | 18 | Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:SorC sugar-binding domain-like
73 | c2e9xF_ |
| not modelled | 6.3 | 40 | PDB header:replication Chain: F: PDB Molecule:dna replication complex gins protein psf2; PDBTitle: the crystal structure of human gins core complex
74 | c3nzeB_ |
| not modelled | 6.2 | 14 | PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1.
75 | d2f8aa1 |
| not modelled | 6.2 | 30 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
76 | c2he3A_ |
| not modelled | 6.1 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase 2; PDBTitle: crystal structure of the selenocysteine to cysteine mutant of human2 glutathionine peroxidase 2 (gpx2)
77 | d3ovwa_ |
| not modelled | 6.1 | 18 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Glycosyl hydrolase family 7 catalytic core
78 | c3dwvB_ |
| not modelled | 6.0 | 40 | PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione peroxidase-like protein; PDBTitle: glutathione peroxidase-type tryparedoxin peroxidase,2 oxidized form
79 | c3hczA_ |
| not modelled | 5.9 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible thiol-disulfide isomerase; PDBTitle: the crystal structure of a domain of possible thiol-disulfide2 isomerase from cytophaga hutchinsonii atcc 33406.
80 | d3ecga1 |
| not modelled | 5.9 | 24 | Fold:Acid proteases Superfamily:Acid proteases Family:Retroviral protease (retropepsin)
81 | d1we0a1 |
| not modelled | 5.8 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
82 | d2rcrh2 |
| not modelled | 5.7 | 22 | Fold:Single transmembrane helix Superfamily:Photosystem II reaction centre subunit H, transmembrane region Family:Photosystem II reaction centre subunit H, transmembrane region
83 | d2fzpa1 |
| not modelled | 5.6 | 71 | Fold:NRDP1 C-terminal domain-like Superfamily:NRDP1 C-terminal domain-like Family:USP8 interacting domain
84 | d1d7ka1 |
| not modelled | 5.6 | 32 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like
85 | c2p5qA_ |
| not modelled | 5.5 | 40 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase 5; PDBTitle: crystal structure of the poplar glutathione peroxidase 5 in2 the reduced form
86 | c2r1fB_ |
| not modelled | 5.5 | 36 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:predicted aminodeoxychorismate lyase; PDBTitle: crystal structure of predicted aminodeoxychorismate lyase from2 escherichia coli
87 | d1jv2a3 |
| not modelled | 5.5 | 19 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Integrin domains Family:Integrin domains
88 | c2ywiA_ |
| not modelled | 5.5 | 6 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus
89 | c2b1kA_ |
| not modelled | 5.4 | 38 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of e. coli ccmg protein
90 | d1f3ta1 |
| not modelled | 5.4 | 31 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like
91 | c2c0dA_ |
| not modelled | 5.3 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin peroxidase 2; PDBTitle: structure of the mitochondrial 2-cys peroxiredoxin from2 plasmodium falciparum
92 | d1njjb1 |
| not modelled | 5.3 | 32 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like
93 | d1y5oa1 |
| not modelled | 5.3 | 13 | Fold:PH domain-like barrel Superfamily:PH domain-like Family:TFIIH domain
94 | d1li4a2 |
| not modelled | 5.1 | 21 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:S-adenosylhomocystein hydrolase
95 | c3f9uA_ |
| not modelled | 5.0 | 31 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported cytochrome c biogenesis-related protein; PDBTitle: crystal structure of c-terminal domain of putative exported cytochrome2 c biogenesis-related protein from bacteroides fragilis
96 | d1bdqa_ |
| not modelled | 5.0 | 29 | Fold:Acid proteases Superfamily:Acid proteases Family:Retroviral protease (retropepsin)

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