Phyre 2 alignment of A0PJW6 with d1u2ma_

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Job Description | A0PJW6
Confidence | 10.74% | Date | Fri May 25 09:28:59 BST 2012
Rank | 34 | Aligned Residues | 18
% Identity | 17% | Template | d1u2ma_
SCOP info | OmpH-like | OmpH-like | OmpH-like
Resolution | 2.30

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 178 | . | 180 | . | . | . | . | . | . | . |  | . | . | 190 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query Sequence |  | F | L | L | D | K | T | G | H | F | P | . | N | T | K | L | F | D | N | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
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Template Sequence |  | L | V | V | D | A | N | A | V | A | Y | N | S | S | D | V | K | D | I | T
Template Known Secondary structure |  |  |  |  |  | G | G | G |  | S |  |  |  | T | T | S |  | B |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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