02/06/2012 19:30:24 : INFO  : Run start: Sat Jun  2 19:30:24 BST 2012
02/06/2012 19:30:24 : INFO  : Initialised job
02/06/2012 19:30:24 : INFO  : Initialised job:
Sequence
>batch____
MAAPWRRWPTGLLAVLRPLLTCRPLQGTTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWA
SMAVAAVSRPPVPVQPLDAEVPNRGPFDLRSALWRYGLAVGCGAIGALVLGAGLLFSLRS
VRSVVLRAGGQQVTLTTHAPFGLGAHFTVPLKQVSCMAHRGEVPAMLPLKVKGRRFYFLL
DKTGHFPNTKLFDNTVGAYRSL

02/06/2012 19:30:24 : INFO  : Checked sequence
02/06/2012 19:30:24 : INFO  : Finding homologues with PSI-BLAST
02/06/2012 19:30:24 : INFO  : PSI-BLAST 3 iterations
02/06/2012 19:31:47 : INFO  : PSI-BLAST 5 iterations
02/06/2012 19:32:48 : INFO  : Finished PSI-BLAST
02/06/2012 19:32:48 : INFO  : Running Buildali to generate a3m file
02/06/2012 19:33:51 : INFO  : Converting to HMM
02/06/2012 19:33:51 : INFO  : Calibrating HMM
02/06/2012 19:33:55 : INFO  : Searching HMM database
02/06/2012 19:37:35 : INFO  : Finished buildali
02/06/2012 19:37:35 : INFO  : Predicting secondary structure
02/06/2012 19:37:35 : INFO  : Predicted secondary structure (PSI-Pred)
02/06/2012 19:37:35 : INFO  : Predicting Disordered regions
02/06/2012 19:37:35 : INFO  : Predicted Disorder (Disopred)
02/06/2012 19:37:35 : INFO  : Running memsat_svm check
02/06/2012 19:37:36 : INFO  : Globular protein
02/06/2012 19:37:36 : INFO  : Predicted Transmembrane (memsat_svm) ID '2896c7f53cbc3de2'
02/06/2012 19:37:36 : INFO  : Initialising fold library search
02/06/2012 19:37:36 : INFO  : Initialised search input
02/06/2012 19:37:36 : INFO  : Building Ensemble models
02/06/2012 19:37:36 : INFO  : Building hh.d1gtra1.model.1.pdb
02/06/2012 19:37:36 : INFO  : Building d1gtra1.1.pdb
02/06/2012 19:37:37 : INFO  : Building d1sr8a_.2.pdb
02/06/2012 19:37:37 : INFO  : Building d2zcta1.3.pdb
02/06/2012 19:37:37 : INFO  : Building d1z5ye1.4.pdb
02/06/2012 19:37:38 : INFO  : Building d2v3ia1.5.pdb
02/06/2012 19:37:38 : INFO  : Building d1gpia_.6.pdb
02/06/2012 19:37:38 : INFO  : Building d1k3ia1.7.pdb
02/06/2012 19:37:38 : INFO  : Building c2rfyB_.8.pdb
02/06/2012 19:37:39 : INFO  : Building d1q9ha_.9.pdb
02/06/2012 19:37:39 : INFO  : Building c1exdA_.10.pdb
02/06/2012 19:37:40 : INFO  : Building c3k44D_.11.pdb
02/06/2012 19:37:40 : INFO  : Building c3ia1A_.12.pdb
02/06/2012 19:37:41 : INFO  : Building d2b5xa1.13.pdb
02/06/2012 19:37:41 : INFO  : Building c3fkfC_.14.pdb
02/06/2012 19:37:41 : INFO  : Building c3razA_.15.pdb
02/06/2012 19:37:41 : INFO  : Building c1yycA_.16.pdb
02/06/2012 19:37:42 : INFO  : Building c3ewlA_.17.pdb
02/06/2012 19:37:42 : INFO  : Building d2e9xb2.18.pdb
02/06/2012 19:37:42 : INFO  : Building c2l5oA_.19.pdb
02/06/2012 19:37:43 : INFO  : Building c3eytA_.20.pdb
02/06/2012 19:37:43 : INFO  : Finished HH model building
02/06/2012 19:37:43 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
02/06/2012 19:37:46 : INFO  : html domain output complete ID '2896c7f53cbc3de2'
02/06/2012 19:40:52 : INFO  : Run end  : Sat Jun  2 19:40:52 BST 2012
