 |
| Job Description | Q53GA4 | | Confidence | 97.32% | Date | Fri May 25 10:06:09 BST 2012 |
| Rank | 21 | Aligned Residues | 91 |
| % Identity | 20% | Template | c2dhiA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:pleckstrin homology domain-containing family b |
PDBTitle: solution structure of the ph domain of evectin-2 from mouse
|
| Resolution | UNK |
|
 |
|   |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | L | R | E | G | E | L | E | K | R | S | D | S | L | F | Q | L | W | K | K | K | R | G | V | L | T | S | D | R | L | S | L | F | P | . |
A | S | P | R | A | R | P | K | E | L | R | F | H | S | I | L | K | V | D | C | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | T | G | K | Y | V | Y | F | T | I | V | T |
| Query Conservation |   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|   |   | . |   |
|   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |
|   |
|   |
|   |   |   |   |   |
|   | . |
|
|   |
|   |
|
|
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
| Template Sequence |   |
F | V | K | S | G | W | L | L | R | Q | S | T | I | L | K | R | . |
W | K | K | N | W | F | D | L | W | S | D | G | H | L | I | Y | Y | D | D | Q | T | R | Q | S | I | E | D | K | V | H | M | P | V | D | C | I | N | I | R | T | G | H | E | C | R | D | I | Q | P | P | D | G | K | P | R | D | C | L | L | Q | I | V | C |
| Template Known Secondary structure |   |
| S |
|  |  |  |  |  |  |  |
| T | T | T |
| S | . |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  | S | S | T | T |
|
| S |
|
|  |  |  |
| T | T | T | T |  |  |  |  |  |
| G | G | G | S |
| S |
|
|
|
| T | T |
|
| S | T | T |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
|   |
|   |   |
75 | . | . | . | . | 80 | . | . | . | . | . | |
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | D | H | K | E | I | D | F | R | C | A | . |
. |
. |
G | E | S | C | W | N | A | A | I | A | L | A | L |
| Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|   | . | . | . |
|   |   |
|
|
|
|
|
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |
| Template Sequence |   |
R | D | G | K | T | I | S | L | C | A | E | S | T | D | D | C | L | A | W | K | F | T | L | Q | D | S | R |
| Template Known Secondary structure |   |
S | S | S |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|