Return to main results Retrieve Phyre Job Id

Job DescriptionQ53GA4
Confidence97.38%DateFri May 25 10:06:09 BST 2012
Rank18Aligned Residues100
% Identity13%Templatec2dhkA_
PDB info PDB header:immune systemChain: A: PDB Molecule:tbc1 domain family member 2; PDBTitle: solution structure of the ph domain of tbc1 domain family2 member 2 protein from human
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10........ .20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 




.
































Query SS confidence 














.































































Query Sequence  PDEVLREGELEKRSD. SLFQLWKKKRGVLTSDRLSLFPASPRARPKELRFHSILKVDCVERTGKYVYFTIVTTDHKEIDF
Query Conservation 
  




 





. 
 





 



 


 
   
     




  

 




 


 






  





Alig confidence 














.































































Template Conservation         


 
 
     
 







                     
 
               
 
        
Template Sequence  SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITL
Template Known Secondary structure 
S




S
SSSS


TTTTSSTT

S
SGGG

TTGGG

SS

Template Predicted Secondary structure 










































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   83.... ..90.........100...
Predicted Secondary structure 



...




Query SS confidence 




. . .















Query Sequence  RCAGE. . . SCWNAAIALALIDFQN
Query Conservation 

 
 ... 







 

 


Alig confidence 




...















Template Conservation   
 
  
   

 

  
      
Template Sequence  KAATKQAMLYWLQQLQMKRWEFHN
Template Known Secondary structure 
SS
Template Predicted Secondary structure 



Template SS confidence 























   85....90.........100........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions