 |
| Job Description | Q53GA4 | | Confidence | 12.11% | Date | Fri May 25 10:06:09 BST 2012 |
| Rank | 95 | Aligned Residues | 37 |
| % Identity | 19% | Template | c1p58C_ |
| PDB info |
PDB header:virus | Chain: C: PDB Molecule:major envelope protein e; |
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
|
| Resolution | 9.50 Å |
|
|   |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | R | F | H | S | I | L | K | V | D | C | V | E | R | T | G | K | Y | V | Y | F | T | I | V | T | T | D | H | K | E | I | D | F | R | C | A | G |
| Query Conservation |   |
|
|
|   |   |
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |
|   |   |
| Template Sequence |   |
M | R | C | I | G | I | S | N | R | D | F | V | E | G | V | S | G | G | S | W | V | D | I | V | L | E | H | G | S | C | V | T | T | M | A | K | N |
| Template Known Secondary structure |   |
| T | G | G | G |
| S |
|  |  |  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  | T | T |
| Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|