 |
| Job Description | Q53GA4 | | Confidence | 89.76% | Date | Fri May 25 10:06:09 BST 2012 |
| Rank | 69 | Aligned Residues | 87 |
| % Identity | 24% | Template | c3a8nA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:t-lymphoma invasion and metastasis-inducing |
PDBTitle: crystal structure of the tiam1 phccex domain
|
| Resolution | 4.50 Å |
|
 |
|   |   |
6 | . | . | . | 10 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | V | L | R | E | G | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | K | R | S | D | S | L | F | Q | L | W | K | K | K | R | G | V | L | T | S | D | R | L | S | L | F | P | A | S | P | R | A | R | P | K | E | L | R | F | H | S | I | L | K | V | D | C | V | . |
E | R | T | G | K | Y | V | Y | F | T | I | V |
| Query Conservation |   |
  |
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |
|
|
|
| . |
|   |
|
|
|   |
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |
|   |
|
|
|   |   |   |   | . | . |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |
| Template Sequence |   |
T | V | R | K | A | G | A | L | A | V | K | N | F | L | V | H | K | K | N | K | K | V | E | S | A | T | R | R | K | W | K | H | Y | W | V | S | L | K | G | C | T | L | F | F | Y | E | T | D | S | V | . |
. |
P | K | H | A | V | W | V | E | N | S | I | V | Q | A | V | P | E | H | P | K | K | D | F | V | F | C | L | S |
| Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | T | T |  |  |
|
| B |
|
|
|
|
| . | . |
| S | S |
|
| B |
|
| S |
|  |  |
|
|
| T | T | S | S | S | S |
| S |
|
|
|  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
433 | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | |
|
. | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 |
|   |
|   |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
. | . | 90 | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|
|
|  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
| Query Sequence |   |
T | T | D | H | K | E | I | D | F | R | C | A | G | E | . |
. |
. |
S | C | W | N | A | A | I |
| Query Conservation |   |
|   |   |
|
|
|
|
|
|
|
|   |
|   | . | . | . |   |
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|
|   |
|
|
| Template Sequence |   |
N | S | L | G | D | A | F | L | F | Q | T | T | S | Q | T | E | L | E | N | W | I | T | A | I |
| Template Known Secondary structure |   |
 | T | T | T |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
519 | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|