Return to main results Retrieve Phyre Job Id

Job DescriptionQ53GA4
Confidence93.41%DateFri May 25 10:06:09 BST 2012
Rank64Aligned Residues92
% Identity14%Templatec2q13A_
PDB info PDB header:protein transportChain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.. .......30.........40.........50.........60.........70....... ..
Predicted Secondary structure 










.




























.
Query SS confidence 




















.






















































.

Query Sequence  KSPDEVLREGELEKRSDSLFQ. LWKKKRGVLTSDRLSLFPASPRARPKELRFHSILKVDCVERTGKYVYFTIVTTDH. KE
Query Conservation    
  




 





 
 
.




 



 


 
   
     




  

 




 


 






  
.

Alig confidence 




















.










.










































.

Template Conservation                
 
 
    
 

   
  .  
             
 
    
           
 
        
Template Sequence  PDPTKFPVNRNLTRKAGYLNARTWDRQFYFTQG. GNLMSQARGDVAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKS
Template Known Secondary structure 

TTTS





S




T.T
SS
SS

TT


TT
SS
TTS
B
Template Predicted Secondary structure 

























.






















Template SS confidence 















































































   266...270.........280.........290........ .300.........310.........320.........330.........340....
 
   80..... ....90....
Predicted Secondary structure 

...






Query SS confidence 





. . .








Query Sequence  IDFRCA. . . GESCWNAAI
Query Conservation 




 ...
  





Alig confidence 





...








Template Conservation    
 
 
      

  
Template Sequence  SILQAESKKDHEEWICTI
Template Known Secondary structure 


SS
Template Predicted Secondary structure 

Template SS confidence 

















   353......360.........370
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions