Return to main results Retrieve Phyre Job Id

Job DescriptionQ53GA4
Confidence97.70%DateFri May 25 10:06:09 BST 2012
Rank7Aligned Residues92
% Identity23%Templatec1u5fA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:src-associated adaptor protein; PDBTitle: crystal structure of the ph domain of skap-hom with 8 vector-derived2 n-terminal residues
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10......... 20.........30.........40.........50.........60. ........70.........
Predicted Secondary structure 





...
























....






Query SS confidence 












. . .









































. . . .

















Query Sequence  VLREGELEKRSDS. . . LFQLWKKKRGVLTSDRLSLFPASPRARPKELRFHSILKVDCV. . . . ERTGKYVYFTIVTTDHKE
Query Conservation 




 





 ...
 





 



 


 
   
     




  

 



....
 


 






  


Alig confidence 












...









































....

















Template Conservation    
 
 
 
           



  

    
  
           
 
                      
       
Template Sequence  VIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRI
Template Known Secondary structure 


SS
SS
STTSSTT
SS
S
TT

TTS
SSTTGGG
TTS
Template Predicted Secondary structure 








































Template SS confidence 















































































   117..120.........130.........140.........150.........160.........170.........180.........190......
 
   80....... ..90........
Predicted Secondary structure 



...




Query SS confidence 







. . .










Query Sequence  IDFRCAGE. . . SCWNAAIALAL
Query Conservation 




 
 ... 







 
Alig confidence 







...










Template Conservation    
 
 
  
   

 

  

Template Sequence  YQFTAASPKDAEEWVQQLKFIL
Template Known Secondary structure 
SS
Template Predicted Secondary structure 

Template SS confidence 





















   197..200.........210........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions