Job Description P46108 Confidence 96.87% Date Wed May 9 17:51:55 BST 2012 Rank 312 Aligned Residues 107 % Identity 8% Template c3npfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi; PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution Resolution 1.72 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	K	G	D	I	L	R	I	R	D	K	P	E	E	Q	W	W	N	A	E	D	S	E	G	K	R	G	M	I	P	V	P	Y	V	E	K	Y	R	P	A	S	A	S	V	S	A	L	I	G	G	N	Q	E	G	S	H	P	Q	P	L	G	G	P	E	P	G	P	Y	A	Q	P	S	V	N	T	P	L	P	N
Query Conservation
Alig confidence														.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	L	G	X	P	V	K	V	L	Q	Y	.	.	N	G	W	Y	E	I	Q	T	P	D	D	Y	T	G	W	V	H	R	X	V	I	T	P	X	S	K	E	R	Y	D	E	W	N	R	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T									.	.	S	S							T	T	S							G	G	G															S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		L	Q	N	G	P	I	Y	A	R	V	I	Q	K	R	V	P	N	A	Y	D	K	T	A	L	A	L	E	V	G	E	L	V	K	V	T	K	I	N	V	S	G	Q	W	E	G	E	C	.	N	G	K	R	G	H	F	P	F	T	H	V	R	L
Query Conservation																																																	.
Alig confidence		.																																					.										.
Template Conservation		.																																					.
Template Sequence		.	K	I	V	V	T	S	H	Y	G	F	A	Y	E	K	P	D	E	S	S	Q	P	V	S	D	V	V	A	G	N	R	L	K	W	E	G	S	.	K	G	H	F	Y	Q	V	S	Y	P	D	G	R	K	A	Y	L	S	K	S	I	S	Q	P
Template Known Secondary structure		.						S	S						S	S	S	S	T	T	S								T	T									.		T	T							T	T	S							T	T	S
Template Predicted Secondary structure		.																																					.
Template SS confidence
			105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions