Job Description P46108 Confidence 99.78% Date Wed May 9 17:51:55 BST 2012 Rank 74 Aligned Residues 89 % Identity 27% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	N	F	D	S	E	E	R	S	S	W	Y	W	G	R	L	S	R	Q	E	A	V	A	L	L	Q	G	Q	R	H	G	V	F	L	V	R	D	S	S	T	S	P	G	D	Y	V	L	S	V	S	E	N	S	R	V	S	H	Y	I	I	N	S	S	G	P	R	P	P	V	P	P	S	P	A	Q	P	P	P	G
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	W	N	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T								T	T															T	T			T	T								S	S	T	T		S								T	T											T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		82	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		V	S	P	S	R	L	R	I	G	D	Q	E	.	.	.	.	.	F	D	S	L	P	A	L	L	E	F	Y	K	I	H	Y
Query Conservation														.	.	.	.	.
Alig confidence		.	.	.	.	.								.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	F	S	F	D	A	H	D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S
Template Known Secondary structure		.	.	.	.	.			S		T	T		T	T	S			B	S	S								T			G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions