Job Description P46108 Confidence 99.84% Date Wed May 9 17:51:55 BST 2012 Rank 25 Aligned Residues 141 % Identity 30% Template c2b3oA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1 Resolution 2.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		S	W	Y	W	G	R	L	S	R	Q	E	A	V	A	L	L	Q	G	Q	.	R	H	G	V	F	L	V	R	D	S	S	T	S	P	G	D	Y	V	L	S	V	S	E	N	S	R	V	S	H	Y	I	I	N	S	S	G	P	R	P	P	V	P	P	S	P	A	Q	P	P	P	G	V	S	P	S	R	L	R	I	G
Query Conservation																					.
Alig confidence																					.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	W	F	H	R	D	L	S	G	L	D	A	E	T	L	L	K	G	R	G	V	H	G	S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	G	D	Q	V	T	H	I	R	I	Q	N	S	G	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	L	Y	G
Template Known Secondary structure		T	T	B		S	S																T	T								S	S	S	S	S									T	T										S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																		.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.														140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																						.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	E	F	D	S	L	P	A	L	L	E	F	Y	K	I	H	Y	L	D	.	.	.	.	.	.	.	T	T	T	L	I	E	P	V	S	R	S	R	Q	G	S	G	V	I	L	R	Q	E	E	A	E	Y	V	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	D	F	N	G	N	D	E	E	D
Query Conservation																						.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.															.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		G	E	K	F	A	T	L	T	E	L	V	E	Y	Y	T	Q	Q	Q	G	V	L	Q	D	R	D	G	T	I	I	H	L	K	Y	P	L	N	C	S	D	P	T	.	S	E	R	W	Y	H	G	H	M	S	G	G	Q	A	E	T	L	L	Q	A	K	G	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G	D
Template Known Secondary structure		S				S											T	T		S		B			S	S	S			B											G	G	.	G		T	T	B		T	T																T	T								S	S	S	T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
				151	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.					.	.	.	.	.	.
Query SS confidence		.	.					.	.	.	.	.	.
Query Sequence		.	.	L	P	F	K	.	.	.	.	.	.	K	G	D	I	L	R	I	R	D	K	P	E	E	Q	W	W
Query Conservation		.	.					.	.	.	.	.	.
Alig confidence		.	.					.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	L	S	V	L	S	D	Q	P	K	S	P	L	R	V	T	H	I	K	V	M	C	E	G	G	R	Y
Template Known Secondary structure																							B			T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions