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Job DescriptionQ15811
Confidence97.45%DateTue Apr 3 14:58:12 BST 2012
Rank332Aligned Residues139
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30...... ...40.........50. ........60.........70.........80.......
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Query Sequence  ITVEERAKHDQQFHSLKPIS. GFITGDQARNFFFQS. . . . . . . . GLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKL
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Template Sequence  TTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKLGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVC. . MDK
Template Known Secondary structure  S

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   368.370.........380.........390.........400.........410.........420.........430.........440.. ...
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  KLQGYQLPSALPPVMKQQPVAISSAPAFGMGGIASMPPLTAVAPVPMGSIPVVGMSPTLVSSVPTAAVPPLANGAPPVIQ
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Template Sequence  QIL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   448.450
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  PLPAFAHPAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPPVAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQART
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FSEERLRRAFNLFDTDKSGKITKEELAN
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TT

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   451........460.........470........
 
   248.250.........260.........270.........280......
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Query Sequence  ILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI
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Template Sequence  LFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKI
Template Known Secondary structure  TT
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   479480.........490.........500.........510.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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