Job Description Q15811 Confidence 97.18% Date Tue Apr 3 14:58:12 BST 2012 Rank 365 Aligned Residues 142 % Identity 27% Template c3ox6C_ PDB info PDB header:calcium binding protein Chain: C: PDB Molecule:calcium-binding protein 1; PDBTitle: crystal structure of the calcium sensor calcium-binding protein 12 (cabp1) Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																							.																	.	.
Query SS confidence																							.																	.	.
Query Sequence		A	I	T	V	E	E	R	A	K	H	D	Q	Q	F	H	S	L	K	P	I	S	.	G	F	I	T	G	D	Q	A	R	N	F	F	F	Q	S	G	.	.	L	P	Q	P	V	L	A	Q	I	W	A	L	A	D	M	N	N	D	G	R	M	D	Q	V	E	F	S	I	A	M	K	L	I	K	L	K	L	Q	G	Y
Query Conservation																							.																	.	.
Alig confidence																							.																	.	.																																				.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		S	L	R	P	E	E	I	E	E	L	R	E	A	F	R	E	F	D	K	D	K	D	G	Y	I	N	C	R	D	L	G	N	C	M	R	T	M	G	Y	M	P	T	E	M	E	L	I	E	L	S	Q	Q	I	N	M	N	L	G	G	H	V	D	F	D	D	F	V	E	L	M	G	P	K	L	L	.	.	.	.	.
Template Known Secondary structure																							S	S	S													T	T																	T	T	S	T	T																	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	S	A	L	P	P	V	M	K	Q	Q	P	V	A	I	S	S	A	P	A	F	G	M	G	G	I	A	S	M	P	P	L	T	A	V	A	P	V	P	M	G	S	I	P	V	V	G	M	S	P	T	L	V	S	S	V	P	T	A	A	V	P	P	L	A	N	G	A	P	P	V	I	Q	P	L	P	A	F
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	P	A	A	T	L	P	K	S	S	S	F	S	R	S	G	P	G	S	Q	L	N	T	K	L	Q	K	A	Q	S	F	D	V	A	S	V	P	P	V	A	E	W	A	V	P	Q	S	S	R	L	K	Y	R	Q	L	F	N	S	H	D	K	T	M	S	G	H	L	T	G	P	Q	A	R	T	I	L	M	Q	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	T	A	D	M	I	G	V	K	E	L	R	D	A	F	R	E	F	D	T	N	G	D	G	E	I	S	T	S	E	L	R	E	A	M	R	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																				T	T		S	S	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																											93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
					253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	L	P	Q	A	Q	L	A	S	I	W	N	L	S	D	I	D	Q	D	G	K	L	T	A	E	E	F	I	L	A	M
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	G	H	Q	V	G	H	R	D	I	E	E	I	I	R	D	V	D	L	N	G	D	G	R	V	D	F	E	E	F	V	R	M	M
Template Known Secondary structure			S	S																T	T	S	S	S	S	B									T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions