Job Description Q15811 Confidence 98.80% Date Tue Apr 3 14:58:12 BST 2012 Rank 68 Aligned Residues 108 % Identity 31% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

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		1595	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.							.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		I	G	R	L	M	V	N	V	V	E	G	I	E	L	K	P	C	R	S	H	G	K	S	N	P	Y	C	E	V	T	M	G	S	.	.	.	.	.	.	Q	C	H	I	T	K	T	I	Q	D	T	L	N	P	K	W	N	S	N	C	Q	F	F	I	R	D	L	E	Q	E	V	L	C	I	T	V	F	E	R	D	Q
Query Conservation																																			.	.	.	.	.	.
Alig confidence																.	.	.																	.	.	.	.	.	.																													.												.
Template Conservation																.	.	.																																																			.												.
Template Sequence		T	R	V	V	R	V	K	V	I	A	G	I	G	L	.	.	.	A	I	L	G	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	N	E	E	I	L	F	R	V	L	P	Q	R	.	H	R	I	L	F	E	V	F	D	E	N	.
Template Known Secondary structure														S		.	.	.																	T	T	T												S	S		S	S													T	T	T	.												.
Template Predicted Secondary structure																.	.	.																																																			.												.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.
		1669	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.						.	.	.	1710	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		F	S	P	D	D	F	L	G	R	T	E	I	R	V	A	D	I	K	K	D	Q	G	S	K	G	P	V	T	K	C	L	L	L	H	E	V	P	T	.	.	.	.	.	G	E	I	V	V	R	L	D
Query Conservation																																								.	.	.	.	.
Alig confidence		.	.	.															.	.	.	.																		.	.	.	.	.
Template Conservation		.	.	.															.	.	.	.
Template Sequence		.	.	.	D	D	F	L	G	Q	V	D	V	P	L	Y	P	L	.	.	.	.	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S	R	V	K	G	Y	L	R	L	K	M	T
Template Known Secondary structure		.	.	.											S		S		.	.	.	.		B											B		S	S	T	T					S
Template Predicted Secondary structure		.	.	.															.	.	.	.
Template SS confidence
					200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions