Job Description Q15811 Confidence 98.86% Date Tue Apr 3 14:58:12 BST 2012 Rank 65 Aligned Residues 117 % Identity 16% Template c3l9bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:otoferlin; PDBTitle: crystal structure of rat otoferlin c2a Resolution 1.95 Å

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		1596	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640		.	.	.	.	.	.	.	.	.	1650	.	.	.			.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.
Predicted Secondary structure																																															.														.	.
Query SS confidence																																															.														.	.
Query Sequence		G	R	L	M	V	N	V	V	E	G	I	E	L	K	P	C	R	S	H	G	K	S	N	P	Y	C	E	V	T	M	G	S	Q	C	H	I	T	K	T	I	Q	D	T	L	N	.	P	K	W	N	S	N	C	Q	F	F	I	R	D	.	.	L	E	Q	E	V	L	C	I	T	V	F	E	R	D	Q	F	S	P	D
Query Conservation																																															.														.	.
Alig confidence																.	.	.	.	.																											.														.	.
Template Conservation																.	.	.	.	.
Template Sequence		M	A	L	I	V	H	L	K	T	V	S	E	L	R	.	.	.	.	.	G	R	A	D	R	I	A	K	V	T	F	R	G	Q	S	F	Y	S	R	V	L	E	N	C	E	D	V	A	D	F	D	E	T	F	R	W	P	V	A	S	S	I	D	R	N	E	V	L	E	I	Q	I	F	N	Y	S	K	V	F	S	N
Template Known Secondary structure													S			.	.	.	.	.	S											T	T													S													S	S				T	T												T	T	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		1673	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	L	G	R	T	E	I	R	V	A	D	I	K	K	D	Q	G	S	K	G	P	V	T	K	C	L	L	L	H	E	V	P	T	G	E	I	V	V	R	L	D	L	Q	L	F	D	E	P
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		K	L	I	G	T	F	R	M	V	L	Q	K	V	V	E	E	.	.	.	.	N	R	V	E	V	S	D	T	L	I	D	D	N	N	A	I	I	K	T	S	L	S	M	E	V	R	Y	Q	A
Template Known Secondary structure											S							.	.	.	.	S											T	T	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions