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Job DescriptionQ15811
Confidence96.69%DateTue Apr 3 14:58:12 BST 2012
Rank431Aligned Residues135
% Identity36%Templatec3k21A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of carboxy-terminus of pfc0420w.
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30...... ...40.........50.... .....60.........70.........80.........90....
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Query Sequence  ITVEERAKHDQQFHSLKPIS. GFITGDQARNFFFQSGLP. QPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQL
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Template Sequence  SNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAA. . . . . . . . . . . .
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   46...50.........60.........70.........80.........90.........100.........110...
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  PSALPPVMKQQPVAISSAPAFGMGGIASMPPLTAVAPVPMGSIPVVGMSPTLVSSVPTAAVPPLANGAPPVIQPLPAFAH
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   175....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  PAATLPKSSSFSRSGPGSQLNTKLQKAQSFDVASVPPVAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSS.
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNK
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   114.....120.........130.........140.........150...
 
   254.....260.........270.........280...
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Query Sequence  . . . . . . LPQAQLASIWNLSDIDQDGKLTAEEFILAM
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Template Sequence  KGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM
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   154.....160.........170.........180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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