Job Description Q15811 Confidence 96.36% Date Tue Apr 3 14:58:12 BST 2012 Rank 474 Aligned Residues 130 % Identity 21% Template c3a8rB_ PDB info PDB header:calcium binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: the structure of the n-terminal regulatory domain of a plant nadph2 oxidase Resolution 2.40 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		R	A	K	H	D	Q	Q	F	H	S	L	K	P	I	S	G	F	I	T	G	D	Q	A	R	N	F	F	F	Q	S	G	L	P	.	.	Q	P	V	L	A	Q	I	W	A	L	A	D	M	N	N	D	G	R	M	D	Q	V	E	F	S	I	A	M	K	L	I	K	L	K	L	Q	G	Y	Q	L	P	S	A	L	P
Query Conservation																																			.	.
Alig confidence																.																			.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	A	A	V	E	K	R	F	N	Q	L	Q	V	D	.	G	V	L	L	R	S	R	F	G	K	C	I	G	M	D	G	S	D	E	F	A	V	Q	M	F	D	S	L	A	R	K	R	G	I	V	K	Q	V	L	T	K	D	E	L	K	D	F	Y	E	Q	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														B	T	.	T	B			G	G	G						T			S																	T			S	S																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	M	K	Q	Q	P	V	A	I	S	S	A	P	A	F	G	M	G	G	I	A	S	M	P	P	L	T	A	V	A	P	V	P	M	G	S	I	P	V	V	G	M	S	P	T	L	V	S	S	V	P	T	A	A	V	P	P	L	A	N	G	A	P	P	V	I	Q	P	L	P	A	F	A	H	P	A	A	T	L
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	K	S	S	S	F	S	R	S	G	P	G	S	Q	L	N	T	K	L	Q	K	A	Q	S	F	D	V	A	S	V	P	P	V	A	E	W	A	V	P	Q	S	S	R	L	K	Y	R	Q	L	F	N	S	H	D	K	T	M	S	G	H	L	T	G	P	Q	A	R	T	I	L	M	Q	S	S	L	P	Q	A	Q	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	G	F	D	N	R	L	R	T	F	F	D	M	V	D	K	N	A	D	G	R	L	T	A	E	E	V	K	E	I	I	A	L	S	A	S	A	N	K	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																								227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
											259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	A	S	I	W	N	L	S	D	I	D	Q	D	G	K	L	T	A	E	E	F	I	L	A	M
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	K	E	R	A	D	E	Y	T	A	L	I	M	E	E	L	D	P	T	N	L	G	Y	I	E	M	E	D	L	E	A	L	L
Template Known Secondary structure																				T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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