Job Description Q15811 Confidence 96.44% Date Tue Apr 3 14:58:12 BST 2012 Rank 460 Aligned Residues 106 % Identity 18% Template c3a8nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: crystal structure of the tiam1 phccex domain Resolution 4.50 Å

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		1465	.	.	.	.	1470	.	.																	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	S	G	K	L	Y	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	G	A	L	A	V	K	N	F	L	V	H	K	K	N	K	K	V	E	S	A	T	R	R	K	W	K	H	Y	W	V	S	L	K	G	C	T	L	F	F	Y	E	T	D	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	H	A	V	W	V	E	N	S	I	V	Q
Template Known Secondary structure																T	T	T																			T	T					B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			B			S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.																					.	.	.	.	.	.	.	490	.	.	.	.	.
		1529	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.		.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	P	T	D	P	S	G	D	E	P	I	F	H	I	S	H	I	D	.	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S	E	L	Y	I	E	T	E	K	K	K	R	E	K	A	Y	L	V	R	S	Q
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		A	V	P	E	H	P	K	K	D	F	V	F	C	L	S	N	S	L	G	D	A	F	L	F	Q	T	T	S	Q	T	E	L	E	N	W	I	T	A	I	H	S	A	C	A	A	A	V	A	R	H	H	H	K	E	D	T	L	R	L	L	K	S	E
Template Known Secondary structure				T	T	S	S	S	S		S							T	T	T								S																								T	T		S
Template Predicted Secondary structure
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions