Job Description Q15811 Confidence 99.60% Date Tue Apr 3 14:58:12 BST 2012 Rank 39 Aligned Residues 103 % Identity 38% Template c2kgrA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: solution structure of protein itsn1 from homo sapiens.2 northeast structural genomics consortium target hr5524a Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		G	S	L	D	I	W	A	I	T	V	E	E	R	A	K	H	D	Q	Q	F	H	S	L	K	P	I	S	.	G	F	I	T	G	D	Q	A	R	N	F	F	F	Q	S	G	L	P	Q	P	V	L	A	Q	I	W	A	L	A	D	M	N	N	D	G	R	M	D	Q	V	E	F	S	I	A	M	K	L	I	K	L	K
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		P	P	V	A	E	W	A	V	P	Q	S	S	R	L	K	Y	R	Q	L	F	N	S	H	D	K	T	M	S	G	H	L	T	G	P	Q	A	R	T	I	L	M	Q	S	S	L	P	Q	A	Q	L	A	S	I	W	N	L	S	D	I	D	Q	D	G	K	L	T	A	E	E	F	I	L	A	M	H	L	I	D	V	A
Template Known Secondary structure				S			S	S	S														T	T	S		S	S															T	T																S	S			S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	Y	Q	L	P	S	A	L	P	P	V	M	K	Q	Q	P	V	A	I	S	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	G	Q	P	L	P	P	V	L	P	P	E	Y	I	P	P	S	F	R	R	V	R	L
Template Known Secondary structure			T	T					S	S			G	G	G	S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions