Job Description Q15811 Confidence 96.88% Date Tue Apr 3 14:58:12 BST 2012 Rank 406 Aligned Residues 100 % Identity 19% Template c2dhkA_ PDB info PDB header:immune system Chain: A: PDB Molecule:tbc1 domain family member 2; PDBTitle: solution structure of the ph domain of tbc1 domain family2 member 2 protein from human Resolution UNK

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		1459	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.							.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		G	P	R	K	F	L	H	S	G	K	L	Y	K	A	K	S	N	.	.	.	.	.	.	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	S	G	K	K	L	C	G	Y	L	S	K	F	G	G	K	G	P	I	R	G	W	K	S	R	W	F	F	Y	D	E	R	K	C	Q	L	Y	Y	S	R	T	A	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	P	L	D	S	I	D	L	S	S	A	V	F	D	C	K
Template Known Secondary structure		S		S												S		S	S	S	S												T	T	T	T						S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S					G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		1533	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	G	D	E	P	I	F	H	I	S	H	I	D	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S	E	L	Y	I	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	A	E	E	G	I	F	E	I	K	T	P	S	R	V	I	T	L	K	A	A	T	K	Q	A	M	L	Y	W	L	Q	Q	L	Q	M	K	R	W	E	F	H	N	S
Template Known Secondary structure		T	T	G	G	G								S	S								S	S																					S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions