Job Description Q15811 Confidence 100.00% Date Tue Apr 3 14:58:12 BST 2012 Rank 9 Aligned Residues 338 % Identity 20% Template c2dfkA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:collybistin ii; PDBTitle: crystal structure of the cdc42-collybistin ii complex Resolution 2.15 Å

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		1229	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.		.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	M	L	T	P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	M	E	S	E	.	L	L	T	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M	C	N	I	K	L	L	K	A	L	R	V	R	K	K	M	S	G
Query Conservation																																													.
Alig confidence																																													.																																.	.
Template Conservation																																																																													.	.
Template Sequence		R	P	L	Q	N	R	D	Q	M	R	A	N	V	I	N	E	I	M	S	T	E	R	H	Y	I	K	H	L	K	D	I	C	E	G	Y	L	K	Q	C	R	K	R	R	D	M	F	S	D	E	Q	L	K	V	I	F	G	N	I	E	D	I	Y	R	F	Q	M	G	F	V	R	D	L	E	K	Q	.	.	Y	N	N
Template Known Secondary structure																																				T								T	T	T											T	T																			.	.			S
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.
		1308	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	M	P	V	K	M	I	G	D	I	L	S	A	Q	L	P	H	M	Q	P	Y	I	R	F	C	S	R	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A	P	D	F	K	E	F	V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T	R	Y	P	L
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		D	D	P	H	L	S	E	I	G	P	C	F	L	E	H	Q	D	G	F	W	I	Y	S	E	Y	C	N	N	H	L	D	A	C	M	E	L	S	K	L	M	K	.	D	S	R	Y	Q	H	F	F	E	A	C	R	L	L	Q	Q	M	I	D	I	A	I	D	G	F	L	L	T	P	V	Q	K	I	C	K	Y	P	L
Template Known Secondary structure		S		G	G	G										T	T	T	G	G	G																				T	T	.	S														T	T			S								T
Template Predicted Secondary structure																																											.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		1388	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L	E	K	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	S	E	Q	L	V	F	N	S	V	T	N	C	L	G	P	R	K	F	L	H	S	G
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.
Template Sequence		Q	L	A	E	L	L	K	Y	T	A	Q	D	H	S	D	Y	R	Y	V	A	A	A	L	A	V	M	R	N	V	T	Q	Q	I	N	E	R	K	R	R	L	E	N	I	D	K	I	A	Q	W	Q	A	S	V	L	D	W	E	G	D	D	I	L	.	.	.	.	.	.	.	.	D	R	S	S	E	L	I	Y	T	G
Template Known Secondary structure									T	S		T	T	S	T	T																											T											S	B	T			S	S		G	G	.	.	.	.	.	.	.	.	G	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260									.	.	.	.	.	.	.	.	.	270
		1468	.	1470	.	.	.	.	.					.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.							.	.	.
Predicted Secondary structure										.	.	.	.																																																												.	.	.	.	.	.
Query SS confidence										.	.	.	.																																																												.	.	.	.	.	.
Query Sequence		K	L	Y	K	A	K	S	N	.	.	.	.	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D	P	S	.	.	.	.	.	.	G	D	E
Query Conservation										.	.	.	.																																																												.	.	.	.	.	.
Alig confidence										.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	A	W	I	Y	Q	P	Y	G	R	N	Q	Q	R	V	F	F	L	F	D	H	Q	M	V	L	C	K	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	R	R	D	I	L	Y	Y	K	G	R	I	D	M	D	K	Y	E	V	I	D	I	E	D	G	R	D	D	D	F	N	V	S	M	K
Template Known Secondary structure							S	S	T	T												T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T										G	G	G								S				S	S	S					S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300															.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		1538	.	1540	.	.	.	.	.	.			.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		P	I	F	H	I	S	H	I	D	.	.	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S	E	L	Y	I	E	T	E	K	K	K	R	E	K	A	Y	L	V	R	S	Q	R
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		N	A	F	K	L	H	N	K	E	T	E	E	V	H	L	F	F	A	K	K	L	E	E	K	I	R	W	L	R	A	F	R	E	E	R	K	M	V	Q	E	D	E	K	I	G	F	E	I	S	E	N	Q	K	R	Q	A
Template Known Secondary structure		S							S	S	S	S								S	S																									T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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