Job Description Q15811 Confidence 96.16% Date Tue Apr 3 14:58:12 BST 2012 Rank 494 Aligned Residues 88 % Identity 19% Template c1u5fA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:src-associated adaptor protein; PDBTitle: crystal structure of the ph domain of skap-hom with 8 vector-derived2 n-terminal residues Resolution 1.90 Å

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		1464	.	.	.	.	.	1470	.	.	.	.	.									.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.
Query Sequence		L	H	S	G	K	L	Y	K	A	K	S	N	.	.	.	.	.	.	.	.	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D	P	S	G
Query Conservation														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	A	G	Y	L	E	K	R	R	K	D	H	S	F	L	G	F	E	W	Q	K	R	W	C	A	L	S	K	T	V	F	Y	Y	Y	G	S	D	K	D	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	G	E	F	A	I	D	G	Y	D	V	R	M	N	N	T	L	R	K
Template Known Secondary structure														S	S		S	S		S										T	T						S	S	T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						T	T							T	T	S		S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		1536	.	.					.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		D	E	P	.	.	.	.	I	F	H	I	S	H	I	D	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		D	G	K	K	D	C	C	F	E	I	C	A	P	D	K	R	I	Y	Q	F	T	A	A	S	P	K	D	A	E	E	W	V	Q	Q	L	K	F	I
Template Known Secondary structure		S	T	T	G	G	G							T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions