Job Description Q15811 Confidence 99.18% Date Tue Apr 3 14:58:12 BST 2012 Rank 52 Aligned Residues 165 % Identity 14% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		1048	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	P	S	N	Y	V	R	L	K	D	S	E	G	S	G	T	A	G	K	T	G	S	L	G	K	K	P	E	I	A	Q	V	I	A	S	Y	T	A	T	G	P	E	Q	L	T	L	A	P	G	Q	L	I	L	I	R	K	K	N	P	G	G	W	W	E	G	E	L	Q	A	R	G	K	K	R	Q	I	G	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A
Template Known Secondary structure				S										S																																										S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		1128	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.						.	.	.	.	1190	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.											.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.											.	.	.	.	.	.	.
Query Sequence		F	P	A	N	Y	V	K	L	L	S	P	G	T	S	K	I	T	P	T	E	P	P	K	S	T	A	L	A	A	V	C	Q	V	I	G	M	Y	D	Y	T	A	Q	N	D	D	E	L	A	F	N	K	G	Q	I	I	N	V	L	.	.	.	.	.	N	K	E	D	P	D	W	W	K	G	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.											.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N
Template Known Secondary structure																								S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
					1196	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	V	N	G	Q	V	G	L	F	P	S	N	Y	V	K	L	T
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure		T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions