Job Description Q15811 Confidence 99.98% Date Tue Apr 3 14:58:12 BST 2012 Rank 20 Aligned Residues 310 % Identity 19% Template c1lb1C_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:guanine nucleotide exchange factor dbs; PDBTitle: crystal structure of the dbl and pleckstrin homology2 domains of dbs in complex with rhoa Resolution 2.81 Å

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		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.							.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	M	E	S	E	L	L	T	.	.	.	.	.	.	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M	C	N	I	K	L	L	K	A	L	R	V	R	K	K	M	S
Query Conservation																																												.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		S	L	A	I	L	R	R	H	V	M	N	E	L	L	D	T	E	R	A	Y	V	E	E	L	L	C	V	L	E	G	Y	A	A	E	M	D	N	P	L	M	A	H	L	I	S	T	G	L	Q	N	K	K	N	I	L	F	G	N	M	E	E	I	Y	H	F	H	N	R	I	F	L	R	E	L	E	S	.	.	.	.
Template Known Secondary structure																																T	T	G	G	G	G		G	G	G	G	G	G	S							T						T	T											T							T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
		1307	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	K	M	P	V	K	M	I	G	D	I	L	S	A	Q	L	P	H	M	Q	P	Y	I	R	F	C	S	R	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A	P	D	F	K	E	F	V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T	R	Y	P
Query Conservation
Alig confidence		.																																									.													.	.	.	.	.
Template Conservation		.																																									.													.	.	.	.	.
Template Sequence		.	C	I	D	C	P	E	L	V	G	R	C	F	L	E	R	M	E	E	F	Q	I	Y	E	K	Y	C	Q	N	K	P	R	S	E	S	L	W	R	Q	C	S	.	D	C	P	F	F	Q	E	C	Q	K	K	L	.	.	.	.	.	D	H	K	L	S	L	D	S	Y	L	L	K	P	V	Q	R	I	T	K	Y	Q
Template Known Secondary structure		.	T	S	S		G	G	G							T	T	T	T	G	G	G																				T	.	T	S											.	.	.	.	.	T		S	S							T							T	T
Template Predicted Secondary structure		.																																									.													.	.	.	.	.
Template SS confidence
			704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.		.	.	.	.	.	.	750	.	.	.	.	.						.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
		1387	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L	E	K	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	S	E	Q	L	V	F	N	S	V	T	N	C	L	G	P	R	K	F	L	H	S
Query Conservation
Alig confidence													.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	L	K	E	M	L	K	Y	S	K	.	H	C	E	G	A	E	D	L	Q	E	A	L	S	S	I	L	G	I	L	K	A	V	N	D	S	M	H	L	I	A	I	T	G	Y	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	G	D	L	G	K	L	L	M	Q	G	S	F	S	V	W	T
Template Known Secondary structure										T		T	.	T	S	T	T																									T	T					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	G	G	G
Template Predicted Secondary structure													.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		777	.	.	780	.	.	.	.	.	.	.		.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.															.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.
		1467	.	.	1470	.	.	.	.	.			.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		G	K	L	Y	K	A	K	S	N	.	.	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D	P	S	G	D	E	P	I	F	H	I	S	H
Query Conservation											.	.
Alig confidence											.	.																									.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		D	H	K	K	G	L	A	R	F	K	P	M	Q	R	H	L	F	L	H	E	K	A	V	L	F	C	K	K	R	E	E	N	G	E	G	.	.	.	.	.	.	.	.	Y	E	K	A	P	S	Y	S	Y	K	Q	S	L	N	M	T	A	V	G	I	T	E	N	V	K	G	D	T	K	K	F	E	I	W	Y	N	A
Template Known Secondary structure									S	S	S										S	S												S	S	S	.	.	.	.	.	.	.	.	G	G	G	S											G	G	G							B	T	T	B	T	T							G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		842	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.									.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.
		1545	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S	E	L	Y	I	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	E	V	Y	I	I	Q	A	P	T	P	E	I	K	A	A	W	V	N	E	I	R	K	V	L	T	S	Q	L	Q	A
Template Known Secondary structure		G	T								S	S
Template Predicted Secondary structure
Template SS confidence
		920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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