Job Description Q15811 Confidence 100.00% Date Tue Apr 3 14:58:12 BST 2012 Rank 17 Aligned Residues 328 % Identity 17% Template c1dbhA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:protein (human sos 1); PDBTitle: dbl and pleckstrin homology domains from hsos1 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1235	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270		.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		E	R	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	M	E	S	.	E	L	L	T	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M	C	N	I	K	L	L	K	A	L	R	V	R	K	K	M	S	G	E	K	M	P	V	K
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		E	Q	T	Y	Y	D	L	V	K	A	F	X	A	E	I	R	Q	Y	I	R	E	L	N	L	I	I	K	V	F	R	E	P	F	V	S	N	S	K	L	F	S	A	N	D	V	E	N	I	F	S	R	I	V	D	I	H	E	L	S	V	K	L	L	G	H	I	E	D	T	V	E	X	T	D	E	G	S	P	H	P
Template Known Secondary structure																													T	T	T							T	T	T											T	T																					T			T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		1314	.	.	.	.	.	1320	.	.	.	.			.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350			.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																											.	.
Query SS confidence													.	.																											.	.
Query Sequence		M	I	G	D	I	L	S	A	Q	L	P	.	.	H	M	Q	P	Y	I	R	F	C	S	R	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A	.	.	P	D	F	K	E	F	V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T	R	Y	P	L	I	I
Query Conservation													.	.																											.	.
Alig confidence													.	.																											.	.
Template Conservation
Template Sequence		L	V	G	S	C	F	E	D	L	A	E	E	L	A	F	D	P	Y	E	S	Y	A	R	D	I	L	R	P	G	F	H	D	R	F	L	S	Q	L	S	K	P	G	A	A	L	Y	L	Q	S	I	G	E	G	F	K	E	A	V	Q	Y	V	L	P	R	L	L	L	A	P	V	Y	H	C	L	H	Y	F	E	L	L
Template Known Secondary structure													T	T	T	T											T	S	T	T											S	T	T										T	T								T					T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.		.	.	1460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L	E	K	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	S	E	Q	L	V	F	N	S	V	T	N	C	.	L	G	P	R	K	F	L	H	S	G	K
Query Conservation																																																																						.
Alig confidence										.																																																												.
Template Conservation										.
Template Sequence		K	Q	L	E	E	K	S	E	.	D	Q	E	D	K	E	C	L	K	Q	A	I	T	A	L	L	N	V	Q	S	G	X	E	K	I	C	S	K	S	L	A	K	R	R	L	S	E	S	A	A	I	K	K	X	N	E	I	Q	K	N	I	D	G	W	E	G	K	D	I	G	Q	C	C	N	E	F	I	X	E	G	T
Template Known Secondary structure									S	.															T													S										T			T								T	T			S			S	S		G	G	G	T
Template Predicted Secondary structure										.
Template SS confidence
		358	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		1469	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		L	Y	K	A	K	S	N	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D	P	S	G	D	E	P	I	F	H	I	S	H	.	I	D	R
Query Conservation																																																																														.
Alig confidence																													.	.	.	.	.	.	.																																											.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		L	T	R	V	G	A	K	H	E	R	H	I	F	L	F	D	G	L	X	I	C	C	K	S	N	H	G	.	.	.	.	.	.	.	Q	P	R	L	P	G	A	S	N	A	E	Y	R	L	K	E	K	F	F	X	R	K	V	Q	I	N	D	K	D	D	T	N	E	Y	K	H	A	F	E	I	I	L	K	D	E	N
Template Known Secondary structure					T	T		S	S								S	S									T	T	.	.	.	.	.	.	.					T	T	S				S									S		S									S	S	S			S							T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.								.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
		1548	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	I	F	S	A	K	S	A	E	E	K	N	N	W	X	A	A	L	I	S	L	Q
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions