Email l.a.kelley@imperial.ac.uk Description P56597 Date Thu Apr 26 09:17:35 BST 2012 Unique Job ID 1fd31c5614167232

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ztqC_ 100.0 39 PDB header:transferase Chain: C: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: hexagonal crystal form p61 of the aquifex aeolicus nucleoside2 diphosphate kinase 2 d1u8wa_ 100.0 28 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 3 c3mpdA_ 100.0 25 PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of nucleoside diphosphate kinase from2 encephalitozoon cuniculi, cubic form, apo 4 d3bbba1 100.0 32 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 5 d1pkua1 100.0 29 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 6 d1nhkl_ 100.0 32 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 7 c2hurF_ 100.0 39 PDB header:signaling protein,transferase Chain: F: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: escherichia coli nucleoside diphosphate kinase 8 c3ngtJ_ 100.0 32 PDB header:transferase Chain: J: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: structure of leishmania ndkb complexed with amp. 9 c3q89H_ 100.0 30 PDB header:transferase Chain: H: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of staphylococcus aureus nucleoside diphosphate2 kinase complexed with cdp 10 d1xiqa_ 100.0 28 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 11 d1s57a_ 100.0 29 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 12 d1ucna_ 100.0 28 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 13 c3js9A_ 100.0 23 PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase family protein; PDBTitle: crystal structure of nucleoside diphosphate kinase family protein from2 babesia bovis 14 c4dutA_ 100.0 35 PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: the structure of nucleoside diphosphate kinase (ndk) from burkholderia2 thailandensis 15 d1w7wa_ 100.0 27 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 16 d1ehwa_ 100.0 31 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 17 d1be4a_ 100.0 29 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 18 d1hlwa_ 100.0 29 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 19 d1nb2a_ 100.0 28 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 20 d2dyaa1 100.0 31 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 21 c2vu5A_ not modelled 100.0 28 PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of pndk from bacillus anthracis 22 c4di6F_ not modelled 100.0 23 PDB header:transferase Chain: F: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of nucleoside-diphosphate kinase from borrelia2 burgdorferi 23 d1k44a_ not modelled 100.0 36 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 24 c1w7wF_ not modelled 100.0 27 PDB header:transferase Chain: F: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: structure and mutational analysis of a plant mitochondrial2 nucleoside diphosphate kinase: identification of residues3 involved in serine phosphorylation and oligomerization. 25 d2az3a1 not modelled 100.0 29 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 26 d1xqia1 not modelled 100.0 39 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 27 d1zs6a1 not modelled 100.0 29 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 28 d1wkja1 not modelled 100.0 32 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 29 d1nsqa_ not modelled 100.0 30 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 30 d2b8qa1 not modelled 100.0 29 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 31 c3b6bF_ not modelled 100.0 28 PDB header:transferase Chain: F: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of acanthamoeba polyphaga mimivirus2 nucleoside diphosphate kinase complexed with dgdp 32 c2az1B_ not modelled 100.0 28 PDB header:transferase Chain: B: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: structure of a halophilic nucleoside diphosphate kinase2 from halobacterium salinarum 33 c3b54A_ not modelled 100.0 28 PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: saccharomyces cerevisiae nucleoside diphosphate kinase 34 c3r9lA_ not modelled 100.0 35 PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of nucleoside diphosphate kinase from giardia2 lamblia featuring a disordered dinucleotide binding site 35 c3g36D_ 99.4 37 PDB header:nuclear protein Chain: D: PDB Molecule:protein dpy-30 homolog; PDBTitle: crystal structure of the human dpy-30-like c-terminal domain 36 c2bx6A_ not modelled 98.1 21 PDB header:transduction protein Chain: A: PDB Molecule:xrp2 protein; PDBTitle: crystal structure of the human retinitis pigmentosa2 protein 2 (rp2) 37 d2ezwa1 not modelled 93.9 26 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit 38 d2hwna1 not modelled 60.3 31 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit 39 d1r2aa_ not modelled 58.0 31 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit 40 c1y7pB_ not modelled 57.1 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein af1403; PDBTitle: 1.9 a crystal structure of a protein of unknown function2 af1403 from archaeoglobus fulgidus, probable metabolic3 regulator 41 c3p04A_ not modelled 39.7 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 42 c2rd5D_ not modelled 34.8 23 PDB header:protein binding Chain: D: PDB Molecule:pii protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana 43 d1ukxa_ not modelled 32.8 22 Fold:UBC-like Superfamily:UBC-like Family:RWD domain 44 d2fgca1 not modelled 27.0 22 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 45 c3bqsB_ not modelled 25.3 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from2 listeria monocytogenes, trigonal form 46 d2fi0a1 not modelled 17.1 12 Fold:SP0561-like Superfamily:SP0561-like Family:SP0561-like 47 d1nfpa_ not modelled 16.2 8 Fold:TIM beta/alpha-barrel Superfamily:Bacterial luciferase-like Family:Non-fluorescent flavoprotein (luxF, FP390) 48 c4dhdA_ not modelled 15.8 18 PDB header:transferase Chain: A: PDB Molecule:polyprenyl synthetase; PDBTitle: crystal structure of isoprenoid synthase a3msh1 (target efi-501992)2 from pyrobaculum calidifontis 49 c2ebkA_ not modelled 15.4 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:rwd domain-containing protein 3; PDBTitle: solution structure of the rwd domain of human rwd domain2 containing protein 3 50 d1kvka2 not modelled 13.4 18 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Mevalonate kinase 51 d1d8ja_ not modelled 12.8 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:The central core domain of TFIIE beta 52 d1ydla1 not modelled 12.3 11 Fold:TFB5-like Superfamily:TFB5-like Family:TFB5-like 53 d1wdcc_ not modelled 12.2 27 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 54 c2z62A_ not modelled 11.4 24 PDB header:immune system Chain: A: PDB Molecule:toll-like receptor 4, variable lymphocyte receptor b; PDBTitle: crystal structure of the tv3 hybrid of human tlr4 and hagfish vlrb.61 55 c1yfdA_ not modelled 11.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 1 beta PDBTitle: crystal structure of the y122h mutant of ribonucleotide2 reductase r2 protein from e. coli 56 c2qnfB_ not modelled 10.8 23 PDB header:hydrolase/dna Chain: B: PDB Molecule:recombination endonuclease vii; PDBTitle: crystal structure of t4 endonuclease vii h43n mutant in2 complex with heteroduplex dna containing base mismatches 57 c4a1qB_ not modelled 10.7 30 PDB header:viral protein Chain: B: PDB Molecule:orf e73; PDBTitle: solution structure of e73 protein from sulfolobus spindle-2 shaped virus ragged hills, a hyperthermophilic3 crenarchaeal virus from yellowstone national park 58 c1go4F_ not modelled 9.8 23 PDB header:cell cycle Chain: F: PDB Molecule:mad1 (mitotic arrest deficient)-like 1; PDBTitle: crystal structure of mad1-mad2 reveals a conserved mad22 binding motif in mad1 and cdc20. 59 d1whza_ not modelled 9.8 25 Fold:dsRBD-like Superfamily:YcfA/nrd intein domain Family:YcfA-like 60 d2dawa1 not modelled 9.8 20 Fold:UBC-like Superfamily:UBC-like Family:RWD domain 61 c3bq3A_ not modelled 9.3 13 PDB header:cell cycle, ligase Chain: A: PDB Molecule:defective in cullin neddylation protein 1; PDBTitle: crystal structure of s. cerevisiae dcn1 62 d2f06a1 not modelled 9.2 10 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 63 c2a3lA_ not modelled 9.2 25 PDB header:hydrolase Chain: A: PDB Molecule:amp deaminase; PDBTitle: x-ray structure of adenosine 5'-monophosphate deaminase from2 arabidopsis thaliana in complex with coformycin 5'-phosphate 64 d2a3la1 not modelled 9.2 25 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:Adenosine/AMP deaminase 65 d1d02a_ not modelled 8.5 36 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease MunI 66 d2f1fa2 not modelled 8.1 12 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 67 c4dbgB_ not modelled 7.9 33 PDB header:ligase Chain: B: PDB Molecule:ring finger protein 31; PDBTitle: crystal structure of hoil-1l-ubl complexed with a hoip-uba derivative 68 d1br1b_ not modelled 7.8 20 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 69 d1bg6a2 not modelled 7.4 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 70 c3dgpB_ not modelled 7.3 14 PDB header:transcription Chain: B: PDB Molecule:rna polymerase ii transcription factor b subunit 5; PDBTitle: crystal structure of the complex between tfb5 and the c-terminal2 domain of tfb2 71 c2daeA_ not modelled 7.3 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kiaa0733 protein; PDBTitle: solution structure of the n-terminal cue domain in the2 human mitogen-activated protein kinase kinase kinase 73 interacting protein 2 (map3k7ip2) 72 d1dzfa1 not modelled 7.3 14 Fold:Restriction endonuclease-like Superfamily:Eukaryotic RPB5 N-terminal domain Family:Eukaryotic RPB5 N-terminal domain 73 c3zvrA_ not modelled 6.7 24 PDB header:hydrolase Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of dynamin 74 d2i5nh2 not modelled 6.3 33 Fold:Single transmembrane helix Superfamily:Photosystem II reaction centre subunit H, transmembrane region Family:Photosystem II reaction centre subunit H, transmembrane region 75 d2nrqa1 not modelled 6.3 19 Fold:RL5-like Superfamily:RL5-like Family:SSO1042-like 76 d2daya1 not modelled 6.2 18 Fold:UBC-like Superfamily:UBC-like Family:RWD domain 77 c2yz0A_ not modelled 6.2 8 PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase gcn2; PDBTitle: solution structure of rwd/gi domain of saccharomyces2 cerevisiae gcn2 78 c3owpB_ not modelled 6.1 45 PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor alpha; PDBTitle: human camp-dependent protein kinase in complex with an inhibitor 79 c3fjqI_ not modelled 6.1 45 PDB header:transferase Chain: I: PDB Molecule:camp-dependent protein kinase inhibitor alpha; PDBTitle: crystal structure of camp-dependent protein kinase catalytic2 subunit alpha in complex with peptide inhibitor pki alpha3 (6-25) 80 c3pooB_ not modelled 6.1 45 PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor alpha; PDBTitle: human camp-dependent protein kinase in complex with an inhibitor 81 c1svhB_ not modelled 6.1 45 PDB header:transferase Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor, alpha PDBTitle: crystal structure of protein kinase a in complex with2 azepane derivative 8 82 c3e8cJ_ not modelled 6.1 45 PDB header:transferase Chain: J: PDB Molecule:camp-dependent protein kinase inhibitor peptide; PDBTitle: crystal structures of the kinase domain of pka in complex with atp-2 competitive inhibitors 83 c3p0mB_ not modelled 6.1 45 PDB header:transferase Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor alpha; PDBTitle: human camp-dependent protein kinase in complex with an inhibitor 84 c1sveB_ not modelled 6.1 45 PDB header:transferase Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor, alpha PDBTitle: crystal structure of protein kinase a in complex with2 azepane derivative 1 85 c1yg0A_ not modelled 6.0 25 PDB header:metal transport Chain: A: PDB Molecule:cop associated protein; PDBTitle: solution structure of apo-copp from helicobacter pylori 86 d1g7sa3 not modelled 5.9 15 Fold:Initiation factor IF2/eIF5b, domain 3 Superfamily:Initiation factor IF2/eIF5b, domain 3 Family:Initiation factor IF2/eIF5b, domain 3 87 c1kxfA_ not modelled 5.8 29 PDB header:viral protein Chain: A: PDB Molecule:sindbis virus capsid protein; PDBTitle: sindbis virus capsid, (wild-type) residues 1-264,2 tetragonal crystal form (form ii) 88 c3odnA_ not modelled 5.7 25 PDB header:membrane protein Chain: A: PDB Molecule:dally-like protein; PDBTitle: the crystal structure of drosophila dally-like protein core domain 89 d2nlya1 not modelled 5.7 16 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:Divergent polysaccharide deacetylase 90 d1ep5a_ not modelled 5.7 24 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 91 d1ywxa1 not modelled 5.6 20 Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:Ribosomal protein S24e 92 c2xecD_ not modelled 5.6 22 PDB header:isomerase Chain: D: PDB Molecule:putative maleate isomerase; PDBTitle: nocardia farcinica maleate cis-trans isomerase bound to2 tris 93 d1ufza_ not modelled 5.6 11 Fold:RuvA C-terminal domain-like Superfamily:HBS1-like domain Family:HBS1-like domain 94 c2yewG_ not modelled 5.4 29 PDB header:virus Chain: G: PDB Molecule:capsid protein; PDBTitle: modeling barmah forest virus structural proteins 95 c3re1B_ not modelled 5.3 18 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthetase; PDBTitle: crystal structure of uroporphyrinogen iii synthase from pseudomonas2 syringae pv. tomato dc3000 96 d1wgla_ not modelled 5.3 23 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 97 d2g7oa1 not modelled 5.3 23 Fold:TraM-like Superfamily:TraM-like Family:TraM-like 98 c3ceuA_ not modelled 5.3 18 PDB header:transferase Chain: A: PDB Molecule:thiamine phosphate pyrophosphorylase; PDBTitle: crystal structure of thiamine phosphate pyrophosphorylase2 (bt_0647) from bacteroides thetaiotaomicron. northeast3 structural genomics consortium target btr268 99 c3h2bB_ not modelled 5.2 15 PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of the sam-dependent methyltransferase2 cg3271 from corynebacterium glutamicum in complex with s-3 adenosyl-l-homocysteine and pyrophosphate. northeast4 structural genomics consortium target cgr113a