Return to main results Retrieve Phyre Job Id

Job DescriptionP56597
Confidence100.00%DateThu Apr 26 09:17:35 BST 2012
Rank25Aligned Residues146
% Identity29%Templated2az3a1
SCOP infoFerredoxin-like Nucleoside diphosphate kinase, NDK Nucleoside diphosphate kinase, NDK
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20...... ...30.........40.........50.........60.........70.........80........
Predicted Secondary structure 




..















Query SS confidence 















. .





























































Query Sequence  YVEKTLAIIKPDIVDK. . EEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHK
Query Conservation   




 






  ..   

  
   

 

  
   

 
 
  

    

  
  

  




 




 
 
Alig confidence 















..





























































Template Conservation    
 

 






     
 

  
   

 
   
   

   
   
    
   
  

  
 


 
 
 
 
 
Template Sequence  HDERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLVSFITSGPVFAMVWEGAD
Template Known Secondary structure 



TT
TT



TGGGTTSTTTSS
STT
Template Predicted Secondary structure 






















Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   8990.........100.........110.........120.........130..... ....140.........150.........160.
Predicted Secondary structure 

















..










Query SS confidence 














































. .

























Query Sequence  AISYWLELLGPNNSLVAKETHPDSLRAIYGTDDLRNALHGSNDFAAA. . EREIRFMFPEVIVEPIPIGQAAKDYL
Query Conservation 

   
 
 




  
    
 



 

     
 

 


 
 
.. 


 



    
          

Alig confidence 

















...

























..













..









Template Conservation 

   
 
 




  
 ...
 



  
     
 

 


 
 
   


  

   
  ..          
Template Sequence  ATRQVRQLMGATDAQDAA. . . PGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELV. . DWDRDASAWV
Template Known Secondary structure 

SSGGGS
...TTS


SSS
S

TTSTT

TTSS
..



TT
Template Predicted Secondary structure 





...













..




Template SS confidence 










































































   84.....90.........100. ........110.........120.........130.........140... ......150...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions