Job Description P56597 Confidence 100.00% Date Thu Apr 26 09:17:35 BST 2012 Rank 26 Aligned Residues 136 % Identity 39% Template d1xqia1 SCOP info Ferredoxin-like Nucleoside diphosphate kinase, NDK Nucleoside diphosphate kinase, NDK Resolution 2.50

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																		.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	E	K	T	L	A	I	I	K	P	D	I	V	D	K	.	.	E	E	E	I	Q	D	I	I	L	R	S	G	F	T	I	V	Q	R	R	K	L	R	L	S	P	E	Q	C	S	N	F	Y	V	E	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	E	K	T	L	L	I	L	K	P	D	A	V	A	R	G	L	V	D	E	I	I	S	R	F	K	K	A	G	L	K	I	V	A	L	K	X	V	K	A	S	P	E	E	I	E	R	F	Y	P	S	S	E	E	W	L	Q	S	A	G	Q	K	L	L	K	A	Y	Q	E	L	G	I	D	P	R	A	K	I	G
Template Known Secondary structure																	T	T													T																				S																						T								S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
									63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.											.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	K	M	F	F	P	N	L	T	A	Y	M	S	S	G	P	L	V	A	M	I	L	A	R	H	K	A	I	S	Y	W	L	E	L	L	G	P	N	N	S	L	V	A	K	E	T	H	P	D	S	L	R	A	I	Y	G	T	D	D	L	.	.	.	.	.	.	.	.	.	.	R	N	A
Query Conservation		.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																													.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.
Template Sequence		T	D	D	P	V	E	V	G	R	I	I	K	R	N	L	V	K	Y	X	T	S	G	P	N	V	V	X	V	L	K	G	N	R	A	V	E	I	V	R	K	L	V	G	P	T	S	P	H	S	A	P	.	.	.	P	G	T	I	R	G	D	Y	S	I	D	S	P	D	L	A	A	E	E	G	R	V	V	F	N	L
Template Known Secondary structure																					T	S	S									S	T	T												S		G	G	G	S		.	.	.	T	T	S																T	T	S					S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	H	G	S	N	D	F	A	A	A	E	R	E	I	R	F	M	F	.	P	E	V	I	V	E
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		V	H	A	S	D	S	P	S	E	A	E	R	E	I	R	F	W	F	R	E	E	E	V	L	E
Template Known Secondary structure						S	S														G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions