Job Description P56597 Confidence 100.00% Date Thu Apr 26 09:17:35 BST 2012 Rank 34 Aligned Residues 108 % Identity 35% Template c3r9lA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of nucleoside diphosphate kinase from giardia2 lamblia featuring a disordered dinucleotide binding site Resolution 2.65 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		V	E	K	T	L	A	I	I	K	P	D	I	V	D	K	.	.	E	E	E	I	Q	D	I	I	L	R	S	G	F	T	I	V	Q	R	R	K	L	R	L	S	P	E	Q	C	S	N	F	Y	V	E	K	Y	G	K	M	F	F	P	N	L	T	A	Y	M	S	S	G	P	L	V	A	M	I	L	A	R	H	K	A
Query Conservation																	.	.
Alig confidence																	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	R	T	F	L	M	V	K	P	D	G	V	Q	R	G	L	V	G	E	I	I	S	R	F	E	R	R	G	F	K	L	V	A	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	S	S	G	P	V	C	A	M	V	W	E	G	A	N	V
Template Known Secondary structure		S														T	T													T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									S	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																												.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	Y	W	L	E	L	L	G	P	N	N	S	L	V	A	K	E	T	H	P	D	S	L	R	A	I	Y	G	T	D	D	L	R	N	A	L	H	G	S	N	D	F	A	A	A	E	R	E	I	R	F	M	F	P	E	V	I	V	E
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		V	S	I	S	R	T	M	M	G	V	T	K	P	A	E	S	A	.	.	.	P	G	T	I	R	G	D	F	G	I	D	V	G	R	N	I	I	H	G	S	A	N	L	D	D	A	A	R	E	I	A	L	W	F	K	P	E	E	V	A
Template Known Secondary structure												S		T	T	T			.	.	.	T	T	S								S	S	T	T							S	S														S	T	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions