Job Description P56597 Confidence 98.12% Date Thu Apr 26 09:17:35 BST 2012 Rank 36 Aligned Residues 112 % Identity 21% Template c2bx6A_ PDB info PDB header:transduction protein Chain: A: PDB Molecule:xrp2 protein; PDBTitle: crystal structure of the human retinitis pigmentosa2 protein 2 (rp2) Resolution 2.1 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		P	P	P	Q	I	Y	V	E	K	T	L	A	I	I	K	P	D	.	.	I	V	D	K	E	E	E	I	Q	D	I	I	L	R	S	G	F	T	I	V	Q	R	R	K	L	R	L	S	P	E	Q	C	S	N	F	Y	V	E	K	Y	G	K	M	F	F	P	N	L	T	A	Y	M	S	S	G	P	L	V	A	M	I
Query Conservation																			.	.
Alig confidence																			.	.																																									.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		Q	R	Q	K	S	S	D	E	S	C	L	V	V	L	F	A	G	D	Y	T	I	A	N	A	R	K	L	I	D	E	M	V	G	K	G	F	F	L	V	Q	T	K	E	V	S	M	K	A	E	D	A	Q	R	V	F	R	E	K	A	.	.	.	.	.	P	D	F	L	P	L	L	N	K	G	P	V	I	A	L	E
Template Known Secondary structure		T	S			S											S	S	T	T															T	T																					G	G	G	G	.	.	.	.	.	G	G	T	G	G	G	S	T	T	S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		L	A	R	H	K	A	I	S	Y	W	L	E	L	L	G	P	N	N	S	L	V	A	K	E	T	H	P	D	S	L	R	A	I	Y	.	G	T	D	D	L	R	N	A	L	H	G	S	N	D	F	A	A	A	E	R	E	I	R	F	M	F
Query Conservation																																				.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.				.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Sequence		F	N	G	D	G	A	V	E	V	C	Q	L	I	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	F	N	G	T	K	.	.	.	.	.	M	F	V	S	E	S	K	E	T	A	S	G	D	V	D	S	F	Y
Template Known Secondary structure				S	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S		.	.	.	.	.					S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.																	.	.	.	320	.	.	.						.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions