Job Description O14681 Confidence 2.96% Date Thu Apr 26 09:49:22 BST 2012 Rank 45 Aligned Residues 52 % Identity 15% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	R	A	S	S	V	L	A	Q	R	R	A	Q	S	I	E	R	K	Q	E	S	E	P	R	I	V	S	R	I	F	Q	C	C	A	W	N	G	G	V	F	W	F	S	L	L	L	F	Y	R	V	F
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		A	K	D	V	A	K	Q	L	K	E	Q	Q	M	V	M	R	G	H	R	E	T	S	M	V	.	H	E	L	N	R	Y	I	P	T	A	A	A	F	G	G	L	C	I	G	A	L	S	V	L	A	D	F	L
Template Known Secondary structure														T	T	T					T	T	T	T	T	.
Template Predicted Secondary structure																										.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions