Job Description O14681 Confidence 4.98% Date Thu Apr 26 09:49:22 BST 2012 Rank 30 Aligned Residues 54 % Identity 11% Template c2akiY_ PDB info PDB header:protein transport Chain: Y: PDB Molecule:preprotein translocase secy subunit; PDBTitle: normal mode-based flexible fitted coordinates of a2 translocating secyeg protein-conducting channel into the3 cryo-em map of a secyeg-nascent chain-70s ribosome complex4 from e. coli Resolution 14.90 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	R	R	R	A	S	S	V	L	A	Q	R	R	A	Q	S	I	E	R	K	Q	E	S	E	P	R	I	V	S	R	I	F	Q	C	C	A	W	N	G	G	V	F	W	F	S	L	L	L	F	Y	R	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	R	E	T	A	D	N	L	K	K	S	G	A	F	V	P	G	I	R	P	G	E	Q	T	A	K	Y	I	D	K	V	M	T	R	L	T	L	V	G	A	L	Y	I	T	F	I	C	L	I	P	E	F	M
Template Known Secondary structure			T	T					T	T	T			S	S	S		T	T	S			S			S	S	S	S	S	S	G	G	G	G	G		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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