 |
| Job Description | P20936 | | Confidence | 99.53% | Date | Fri May 25 10:08:08 BST 2012 |
| Rank | 175 | Aligned Residues | 98 |
| % Identity | 28% | Template | d2coda1 |
| SCOP info | PH domain-like barrel
| PH domain-like
| Pleckstrin-homology domain (PH domain)
|
| Resolution | UNK |
|
 |
|   |   |
476 | . | . | . | 480 | . | . | . | . | . | . | . | |
|
. | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | K | K | G | Y | L | L | K | K | G | K | G | . |
. |
K | R | W | K | N | L | Y | F | I | L | E | G | S | D | A | Q | L | I | Y | F | E | S | E | K | R | A | T | K | P | K | G | L | I | D | L | S | V | C | S | V | Y | V | V | H | D | S | L | F | G | R | P | N | C | F | Q | I | V | V | Q | H | F | S | E | E | H | Y |
| Query Conservation |   |
  |
|   |
|   |
|   |
|
|
|
|   | . | . |   |   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
| Template Conservation |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   | . | . |   |
|   |
|   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |
| Template Sequence |   |
V | K | S | G | W | L | D | K | L | S | P | Q | G | K | R | M | F | Q | K | R | W | V | K | F | D | G | L | . |
. |
S | I | S | Y | Y | N | N | E | K | E | . |
M | Y | S | K | G | I | I | P | L | S | A | I | S | T | V | R | V | . |
. |
. |
. |
. |
Q | G | D | N | K | F | E | V | V | T | T | . |
. |
. |
. |
. |
Q | R |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
| S | S | S | S | S |
|
|  |  |  |  |  |  |  |
| S | S | . | . |  |  |  |  |  |  | S | S |
|
| . | S | S |
|
|
|  |  |  | T | T | T |  |  |  |  |  |  | . | . | . | . | . |  | T | T | T |  |  |  |  |  |  | S | . | . | . | . | . | S |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . |
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
. | . |
|   |
|   |   |
554 | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | F | Y | F | A | G | E | T | P | E | Q | A | E | D | W | M | K | G | L | Q | A | F | C | N | L | R | K | S | S | P | G | T | S |
| Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
| Template Sequence |   |
T | F | V | F | R | V | E | K | E | E | E | R | N | D | W | I | S | I | L | L | N | A | L | K | S | Q | S | L | T | S | Q | S | Q |
| Template Known Secondary structure |   |
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|