Job Description P20936 Confidence 100.00% Date Fri May 25 10:08:08 BST 2012 Rank 4 Aligned Residues 255 % Identity 32% Template d1nf1a_ SCOP info GTPase activation domain, GAP GTPase activation domain, GAP p120GAP domain-like Resolution 2.50

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		724	.	.	.	.	.	730	.					.	.	.	.	.	.	.	.	740	.	.	.	.	.	.		.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																.
Query SS confidence										.	.	.	.																.
Query Sequence		S	E	F	K	E	L	I	L	.	.	.	.	Q	K	E	L	H	V	V	Y	A	L	S	H	V	C	G	.	Q	D	R	T	L	L	A	S	I	L	L	R	I	F	L	H	E	K	L	E	S	L	L	L	C	T	L	N	D	R	E	I	S	M	E	D	E	A	T	T	L	F	R	A	T	T	L	A	S	T	L	M
Query Conservation										.	.	.	.																.
Alig confidence										.	.	.	.																.
Template Conservation
Template Sequence		E	R	L	V	E	L	V	T	M	M	G	D	Q	G	E	L	P	I	A	M	A	L	A	N	V	V	P	C	S	Q	W	D	E	L	A	R	V	L	V	T	L	F	D	S	R	H	L	L	Y	Q	L	L	W	N	M	F	S	K	E	V	E	L	A	D	S	M	Q	T	L	F	R	G	N	S	L	A	S	K	I	M
Template Known Secondary structure			T										T		T	T	S	T	T						T	T	S		G	G	G														T	T	T													T	T	S	S	S	S	S	T	T	S	T	T		S			T	T
Template Predicted Secondary structure
Template SS confidence
		1206	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.
		799	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	Y	M	K	A	T	A	T	Q	F	V	H	H	A	L	K	D	S	I	L	K	I	M	E	S	K	Q	S	C	E	L	S	P	S	K	L	E	K	N	E	D	V	N	T	N	L	T	H	L	L	N	I	L	S	E	L	V	E	K	I	F	M	A	S	E	I	L	P	P	T	L	R	Y	I	Y	G	C	L	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	C	F	K	V	Y	G	A	T	Y	L	Q	K	L	L	D	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	E	N	Q	R	N	L	L	Q	M	T	E	K	F	F	H	A	I	I	S	S	S	S	E	F	P	P	Q	L	R	S	V	C	H	C	L	Y
Template Known Secondary structure										T	T					S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T	T	S	T	T	T	T											T	T	T	T			T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1286	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.																							.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.
		879	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	Q	H	K	W	P	T	N	T	T	M	R	T	R	V	V	S	G	F	V	F	L	R	L	I	C	P	A	I	L	N	P	R	M	F	N	I	I	S	D	S	P	S	P	I	A	A	R	T	L	I	L	V	A	K	S	V	Q	N	L	A	N	L	V	E	F	G	A	K	E	P	Y	M	E	G	V	N	P
Query Conservation
Alig confidence												.	.	.																												.	.	.	.	.	.	.	.																						.
Template Conservation												.	.	.																												.	.	.	.	.	.	.	.																						.
Template Sequence		Q	V	V	S	Q	R	F	P	Q	N	.	.	.	S	I	G	A	V	G	S	A	M	F	L	R	F	I	N	P	A	I	V	S	P	Y	E	A	P	I	I	.	.	.	.	.	.	.	.	E	R	G	L	K	L	M	S	K	I	L	Q	S	I	A	N	H	V	L	F	T	.	K	E	E	H	M	R	P	F	N	D
Template Known Secondary structure					T	T	T			S	S	.	.	.													T								T	T						.	.	.	.	.	.	.	.						T											T					.	S	S	T	T	S	G	G	G
Template Predicted Secondary structure												.	.	.																												.	.	.	.	.	.	.	.																						.
Template SS confidence
		1370	.	.	.	.	.	.	.	.	.				1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.									.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.		.	.	1430	.	.	.	.	.	.	.
		959	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	K	S	N	K	H	R	M	I	M	F	L	D	E	L	G	N	V	P	E	L	P	D	T	T	E	H	S	R	T	D	L	S	R	D	L	A	A	L	H	E	I	C	V	A	H	S	D	E	L	R	T	L	S	N	E	R	G	A	Q	Q	H	V	L	K	K	L	L	A	I	T	E	L	L	Q	Q	K	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		F	V	K	S	N	F	D	A	A	R	R	F	F	L	D	I	A	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	R	L	L	W	N	N	Q	E	K	I	G	Q	Y	L	S	S	R	P	.	.	.	.	.	F	D	K	M	A	T	L	L	A	Y	L	G	P	P	E
Template Known Secondary structure						T											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.							T	T					S	T	T				.	.	.	.	.										T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		1446	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.																					.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.						.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions