 |
| Job Description | P20936 | | Confidence | 99.40% | Date | Fri May 25 10:08:08 BST 2012 |
| Rank | 201 | Aligned Residues | 101 |
| % Identity | 22% | Template | d1dsya_ |
| SCOP info | C2 domain-like
| C2 domain (Calcium/lipid-binding domain, CaLB)
| Synaptotagmin-like (S variant)
|
| Resolution | 2.60 |
|
 |
|   |   |
592 | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | |
|
|
. | . | . | . | . | . | . | . | . | 620 | |
|
|
|
. | . | . | . | . | . | . | . | . | 630 | . | . | |
. | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | |
|
. | . | . | . | . | . | 660 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | V | S | S | L | V | L | H | I | E | E | A | H | K | L | P | V | K | H | . |
. |
. |
F | T | N | P | Y | C | N | I | Y | L | . |
. |
. |
. |
N | S | V | Q | V | A | K | T | H | A | R | E | . |
G | Q | N | P | V | W | S | E | E | F | V | F | D | D | L | P | P | D | I | N | R | . |
. |
F | E | I | T | L | S | N | K |
| Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |
|   |
|   |
| . | . | . | . |   |   |   |   |   |   |
|
|   |   |
|   | . |   |   |   |
|   |
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |
| . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
| Template Sequence |   |
T | D | E | K | L | H | V | T | V | R | D | A | K | N | L | I | P | M | D | P | N | G | L | S | D | P | Y | V | K | L | K | L | I | P | D | P | K | N | E | S | K | Q | K | T | K | T | I | R | S | T | L | N | P | Q | W | N | E | S | F | T | F | . |
K | L | K | P | S | D | K | D | R | R | L | S | V | E | I | W | D | W |
| Template Known Secondary structure |   |
| S | S |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
| S | T | T | S |
|
|
|  |  |  |  |  |  |  |  | S |
| T | T |
|
|
|
|  |  |
|
|
|
|
| S |
| S | S |
|  |  |  |  |  |  |  |  | . |  |
|
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |
|
| Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  | . |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
|   |
|   |   |
662 | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | K | K | S | K | D | P | D | I | L | F | M | R | C | Q | L | S | R | L | Q | K | G | H | A | T | D | E | W | F | L | L | S | S |
| Query Conservation |   |
  |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   | . |   |   |   |   |   |   |   |
|   |   |
|   |   |
| Template Sequence |   |
D | R | T | T | R | N | D | F | M | G | S | L | S | F | G | V | S | E | L | . |
M | K | M | P | A | S | G | W | Y | K | L | L | N |
| Template Known Secondary structure |   |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | S |
|  |  |  |  |  |  |
| B |
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | |
. | . | . | 270 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|