Job Description P20936 Confidence 40.77% Date Fri May 25 10:08:08 BST 2012 Rank 313 Aligned Residues 69 % Identity 10% Template c3pubA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:30kda protein; PDBTitle: crystal structure of the bombyx mori low molecular weight lipoprotein2 7 (bmlp7) Resolution 1.91 Å

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		791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		T	T	L	A	S	T	L	M	E	Q	Y	M	K	A	T	A	T	Q	F	V	H	H	A	L	K	D	S	I	L	K	I	M	E	S	K	Q	S	C	E	L	S	P	S	K	L	E	K	N	E	D	V	N	T	N	L	T	H	L	L	N	I	L	S	E	L	V	E	K	I	F	M	A	.	.	S	E	I	L	P	P
Query Conservation																																																																										.	.
Alig confidence															.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation															.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	I	V	V	A	D	Y	D	S	A	V	E	.	K	S	K	H	L	Y	E	E	K	K	S	E	V	I	T	N	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	L	I	R	N	N	K	M	N	C	M	E	Y	A	Y	Q	L	W	L	Q	G	S	K	D	I	V	R	D	C	F	P	V
Template Known Secondary structure						T	T								.								T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		T												T	T									S
Template Predicted Secondary structure															.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		869	870	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	Y	I	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	R	L	I	F	A
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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