Job Description P20936 Confidence 97.88% Date Fri May 25 10:08:08 BST 2012 Rank 246 Aligned Residues 94 % Identity 15% Template c3odxA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 1; PDBTitle: crystal structure of an n-terminally truncated linker-dh/ph domains of2 p115-rhogef Resolution 3.20 Å

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		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.				.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		V	K	K	G	Y	L	L	K	K	G	K	G	K	R	W	K	N	L	Y	F	I	L	E	G	S	D	A	Q	L	I	Y	F	E	S	E	K	R	A	T	K	.	.	.	P	K	G	L	I	D	L	S	V	C	S	V	Y	V	V	H	D	S	L	F	G	R	P	N	C	F	Q	I	V	V	Q	H	F	S	E	E	H
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.																		.	.	.												.	.	.	.	.
Template Conservation																																																														.	.	.												.	.	.	.	.
Template Sequence		V	H	E	G	P	L	T	W	R	V	T	K	D	K	A	V	E	V	H	V	L	L	L	D	D	L	L	L	L	L	Q	R	Q	D	E	R	L	L	L	K	S	H	S	L	R	P	V	L	R	L	T	S	A	M	T	R	E	V	A	T	.	.	.	D	H	K	A	F	Y	V	L	F	T	E	.	.	.	.	.	A
Template Known Secondary structure													T	T											S	S									T	T											S				G	G	G							T	T	.	.	.		T	T									.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.												.	.	.	.	.
Template SS confidence
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.				.	710	.	.	.	.	.	.	.	.	.						720
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	F	Y	F	A	G	E	T	P	E	Q	A	E	D	W	M	K	G	L	Q	A	F	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	Y	E	L	V	A	Q	T	V	S	E	R	K	N	W	C	A	L	I	T	E	T	A	G
Template Known Secondary structure									S	S
Template Predicted Secondary structure
Template SS confidence
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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