Job Description P20936 Confidence 99.72% Date Fri May 25 10:08:08 BST 2012 Rank 88 Aligned Residues 115 % Identity 17% Template c3l9bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:otoferlin; PDBTitle: crystal structure of rat otoferlin c2a Resolution 1.95 Å

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		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.		.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.			.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Predicted Secondary structure																																									.																				.	.
Query SS confidence																																									.																				.	.
Query Sequence		S	L	V	L	H	I	E	E	A	H	K	L	P	V	K	H	F	T	N	P	Y	C	N	I	Y	L	N	S	V	Q	V	A	K	T	H	A	R	E	G	.	Q	N	P	V	W	S	E	E	F	V	F	D	D	L	P	P	D	I	N	.	.	R	F	E	I	T	L	S	N	K	T	K	K	S	K	D	P	D	I	L
Query Conservation																																									.																				.	.
Alig confidence																	.	.																							.																				.	.
Template Conservation																	.	.
Template Sequence		A	L	I	V	H	L	K	T	V	S	E	L	R	G	R	.	.	A	D	R	I	A	K	V	T	F	R	G	Q	S	F	Y	S	R	V	L	E	N	C	E	D	V	A	D	F	D	E	T	F	R	W	P	V	A	S	S	I	D	R	N	E	V	L	E	I	Q	I	F	N	Y	S	K	V	F	S	N	K	L	I	G
Template Known Secondary structure												S			S		.	.										T	T													S													S	S				T	T												T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	R	C	Q	L	S	R	L	Q	K	G	H	A	T	D	E	W	F	L	L	S	S	H	I	P	L	K	G	I	E	P	G	S	L	R	V	R	A	R	Y	S
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		T	F	R	M	V	L	Q	K	V	V	E	E	N	R	V	E	V	S	D	T	L	I	D	D	N	N	A	I	.	.	I	K	T	S	L	S	M	E	V	R	Y	Q
Template Known Secondary structure							S							S											T	T	S			.	.
Template Predicted Secondary structure																														.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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