Return to main results Retrieve Phyre Job Id

Job DescriptionP20936
Confidence97.22%DateFri May 25 10:08:08 BST 2012
Rank260Aligned Residues97
% Identity14%Templatec3ksyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:son of sevenless homolog 1; PDBTitle: crystal structure of the histone domain, dh-ph unit, and2 catalytic unit of the ras activator son of sevenless (sos)
Resolution3.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   473......480.........490.........500.........510...... ...520.........530.........540...
Predicted Secondary structure 
































.........













Query SS confidence 











































. . . . . . . . .


























Query Sequence  KNIVKKGYLLKKGKGKRWKNLYFILEGSDAQLIYFESEKRATKP. . . . . . . . . KGLIDLSVCSVYVVHDSLFGRPNCFQI
Query Conservation    
 
 
 
 



   

   


      
           
.........   


    
  

 
   
  

 
Alig confidence 















...






.
















.........
















.








Template Conservation 
 




 
     
 ... 
  


. 
 

 

               
  
    
    
 
  
 .    
 
 
Template Sequence  NEFIMEGTLTRVGAKH. . . ERHIFLF. DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDT. NEYKHAFEI
Template Known Secondary structure  S



TT
SS...
.TT

TT



TTS


S






SS







S.SS

S
Template Predicted Secondary structure 





....























.



Template SS confidence 















































































   442.......450....... ..460.... .....470.........480.........490.........500....... ..510......
 
   544.....550.........560.........570........
Predicted Secondary structure 













Query SS confidence 


































Query Sequence  VVQHFSEEHYIFYFAGETPEQAEDWMKGLQAFCNL
Query Conservation                   
      

  

     
Alig confidence 



....


























Template Conservation      ....  
  
 
 
 


  
   
 
   
Template Sequence  ILKD. . . . ENSVIFSAKSAEEKNNWMAALISLQYR
Template Known Secondary structure 

TT....S


SS
Template Predicted Secondary structure 


....



Template SS confidence 


































   517..520 .........530.........540.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions