Job Description P20936 Confidence 99.65% Date Fri May 25 10:08:08 BST 2012 Rank 117 Aligned Residues 92 % Identity 22% Template c3a8nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: crystal structure of the tiam1 phccex domain Resolution 4.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		475	.	.	.	.	480	.	.	.	.	.														.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	K	K	G	Y	L	L	K	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	K	R	W	K	N	L	Y	F	I	L	E	G	S	D	A	Q	L	I	Y	F	E	S	E	K	R	A	T	K	P	K	G	L	I	D	L	S	V	C	S	V	Y	V	V	H	D	S	L	F	G	R	P	N	C	F
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																.	.										.	.	.																					.
Template Conservation																																									.	.										.	.	.																					.
Template Sequence		V	R	K	A	G	A	L	A	V	K	N	F	L	V	H	K	K	N	K	K	V	E	S	A	T	R	R	K	W	K	H	Y	W	V	S	L	K	G	C	.	.	T	L	F	F	Y	E	T	D	S	.	.	.	V	P	K	H	A	V	W	V	E	N	S	I	V	Q	A	V	P	E	H	P	.	K	K	D	F	V	F
Template Known Secondary structure			S															T	T	T																			T	T	.	.					B					.	.	.			S	S			B			S							T	T	S	S	.	S	S		S
Template Predicted Secondary structure																																									.	.										.	.	.																					.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	V	Q	H	F	S	E	E	H	Y	I	F	Y	F	A	G	E	T	P	E	Q	A	E	D	W	M	K	G	L	Q	A	F	C
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		C	L	S	N	S	L	.	.	.	.	G	D	A	F	L	F	Q	T	T	S	Q	T	E	L	E	N	W	I	T	A	I	H	S	A	C
Template Known Secondary structure						T	T	.	.	.	.	T								S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		516	.	.	.	520	.					.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions