Job Description P20936 Confidence 99.52% Date Fri May 25 10:08:08 BST 2012 Rank 182 Aligned Residues 121 % Identity 26% Template c2r83B_ PDB info PDB header:endocytosis, exocytosis Chain: B: PDB Molecule:synaptotagmin-1; PDBTitle: crystal structure analysis of human synaptotagmin 1 c2a-c2b Resolution 2.70 Å

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		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610				.	.	.	.	.	.	.	.	.	620			.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.				.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure																			.	.	.											.	.											.																						.	.	.
Query SS confidence																			.	.	.											.	.											.																						.	.	.
Query Sequence		S	S	L	V	L	H	I	E	E	A	H	K	L	P	V	K	H	.	.	.	F	T	N	P	Y	C	N	I	Y	L	.	.	N	S	V	Q	V	A	K	T	H	A	.	R	E	G	Q	N	P	V	W	S	E	E	F	V	F	D	D	L	P	P	D	I	.	.	.	N	R	F	E	I	T	L	S	N	K	T	K	K
Query Conservation																			.	.	.											.	.											.																						.	.	.
Alig confidence																			.	.	.											.	.											.															.							.	.	.
Template Conservation																																																											.
Template Sequence		N	Q	L	L	V	G	I	I	Q	A	A	E	L	P	A	L	D	M	G	G	T	S	D	P	Y	V	K	V	F	L	L	P	D	K	K	K	K	F	E	T	K	V	H	R	K	T	L	N	P	V	F	N	E	Q	F	T	F	.	K	V	P	Y	S	E	L	A	G	K	T	L	V	M	A	V	Y	D	F	D	R	F
Template Known Secondary structure		T														S		S	S	T	T												T			S										S		S	S										.				G	G	G		T	T												S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	D	P	D	I	L	F	M	R	C	Q	L	S	R	L	Q	K	G	H	A	T	D	E	W	F	L	L	S	S	H	I	P	L	K	G	I	E	P	G	S	L	R	V	R	A	R	Y	S	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	H	D	I	I	G	E	F	K	V	P	M	N	T	V	D	F	G	H	V	T	E	E	W	R	D	L	Q	S	A	E	K	E	E	Q	E	K	L	G	D	I	C	F	S	L	R	Y	V	P	T
Template Known Secondary structure		S												G	G	G				S	S									B			S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions