Job Description P20936 Confidence 99.64% Date Fri May 25 10:08:08 BST 2012 Rank 125 Aligned Residues 106 % Identity 22% Template c2q3xA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein 1; PDBTitle: the rim1alpha c2b domain Resolution 1.73 Å

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		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610		.	.	.	.	.	.	.	.	.	620					.	.	.	.	.	.	.	.	.	630		.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.		660	.	.	.	.	.	.
Predicted Secondary structure																			.											.	.	.	.											.																														.
Query SS confidence																			.											.	.	.	.											.																														.
Query Sequence		S	S	L	V	L	H	I	E	E	A	H	K	L	P	V	K	H	.	F	T	N	P	Y	C	N	I	Y	L	.	.	.	.	N	S	V	Q	V	A	K	T	H	A	.	R	E	G	Q	N	P	V	W	S	E	E	F	V	F	D	D	L	P	P	D	I	N	R	F	E	I	T	L	S	.	N	K	T	K	K	S	K
Query Conservation																			.											.	.	.	.											.																														.
Alig confidence																			.											.	.	.	.											.															.															.
Template Conservation																																																											.
Template Sequence		G	Q	L	E	V	E	V	I	R	A	R	S	L	T	Q	K	P	S	T	P	A	P	Y	V	K	V	Y	L	L	E	N	G	A	C	I	A	K	K	K	T	R	I	A	R	K	T	L	D	P	L	Y	Q	Q	S	L	V	F	.	D	E	S	P	Q	G	K	V	L	Q	V	I	V	W	G	D	Y	G	R	X	D	H
Template Known Secondary structure		T											S																			T	T													S		S	S										.	S	S			T	T												S	T	T		S
Template Predicted Secondary structure																																																											.
Template SS confidence
		1474	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530		.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	D	I	L	F	M	R	C	Q	L	S	R	L	Q	K	G	H	A	T	D	E	W	F	L	L	S	S	H	I	P	L	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	C	F	X	G	V	A	Q	I	L	L	E	E	L	D	L	S	S	X	V	I	G	W	Y	K	L	F	P	P	S	S	L	V	D
Template Known Secondary structure		S										G	G	G	S		T	T	S									B		G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		1556	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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