Job Description P20936 Confidence 100.00% Date Fri May 25 10:08:08 BST 2012 Rank 9 Aligned Residues 247 % Identity 25% Template c2oq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase zap-70; PDBTitle: tandem sh2 domains of zap-70 with 19-mer zeta1 peptide Resolution 1.90 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																											.																																											.	.
Query SS confidence																											.																																											.	.
Query Sequence		A	P	P	T	N	Q	W	Y	H	G	K	L	D	R	T	I	A	E	E	R	L	R	Q	A	G	.	K	S	G	S	Y	L	I	R	E	S	D	R	R	P	G	S	F	V	L	S	F	L	S	Q	M	N	V	V	N	H	F	R	I	I	A	M	C	G	D	Y	Y	I	.	.	G	G	R	R	F	S	S	L	S	D
Query Conservation																											.																																											.	.
Alig confidence																											.																							.																				.	.
Template Conservation																																																		.
Template Sequence		P	A	A	H	L	P	F	F	Y	G	S	I	S	R	A	E	A	E	E	H	L	K	L	A	G	X	A	D	G	L	F	L	L	R	Q	C	L	R	S	L	G	G	Y	V	L	S	L	V	.	H	D	V	R	F	H	H	F	P	I	E	R	Q	L	N	G	T	Y	A	I	A	G	G	K	A	H	C	G	P	A	E
Template Known Secondary structure		T	T	T	T		T	T	B		B	S													T	T			T	T								S	S	S	T	T								.		T	T											T	T	S					T	T	S			B	S	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	Y	Y	S	H	V	S	C	L	L	K	G	E	K	L	L	Y	P	V	A	P	P	E	P	V	E	D	R	R	R	V	R	A	I	L	P	Y	T	K	V	P	D	T	D	E	I	S	F	L	K	G	D	M	F	I	V	H	N	E	L	E	D	G	W	M	W	V	T	N	L	R	T	D	E	Q	G	L	I
Query Conservation
Alig confidence																.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	E	F	Y	S	R	D	P	D	G	L	P	C	.	N	L	R	K	P	C	N	R	P	S	G	L	E	P	Q	P	G	V	F	D	C	L	R	D	A	X	V	R	D	Y	V	R	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	L	E	G	E	A	L	E	Q	A	I	I
Template Known Secondary structure											T	T	S	S	S	.				S	B					T	T				B																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																			.	.	.	.	.	.	.	140	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																																	.
Query SS confidence																																								.																																	.
Query Sequence		V	E	D	L	V	E	E	V	G	R	E	E	D	P	H	E	G	K	I	W	F	H	G	K	I	S	K	Q	E	A	Y	N	L	L	M	T	V	G	.	Q	V	C	S	F	L	V	R	P	S	D	N	T	P	G	D	Y	S	L	Y	F	R	T	N	E	N	I	Q	R	F	K	I	.	C	P	T	P	N	N	Q	F
Query Conservation																																								.																																	.
Alig confidence																																								.											.																						.
Template Conservation																																																			.
Template Sequence		S	Q	A	P	Q	V	E	K	L	I	A	T	T	A	H	E	R	X	P	W	Y	H	S	S	L	T	R	E	E	A	E	R	K	L	Y	S	G	A	Q	T	D	G	K	F	L	L	R	P	R	.	K	E	Q	G	T	Y	A	L	S	L	I	Y	G	K	T	V	Y	H	Y	L	I	S	Q	D	K	A	G	K	Y	C
Template Known Secondary structure															G	G	G	G	S	T	T	B		S	S												S	S				T	T								.	S	S	T	T									T	T											T	T	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	G	G	R	Y	Y	N	S	I	G	D	I	I	D	H	Y	R	K	E	Q	I	V	E	G	Y	Y	L	K	E	P	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	E	G	T	K	F	D	T	L	W	Q	L	V	E	Y	L	K	L	K	A	D	G	L	I	Y	C	L	K	E	A	C	P
Template Known Secondary structure		S	T	T	S			B	S	S													T	T	S	S	S				S	B
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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