Job Description P20936 Confidence 99.52% Date Fri May 25 10:08:08 BST 2012 Rank 178 Aligned Residues 116 % Identity 13% Template c2nq3A_ PDB info PDB header:ligase Chain: A: PDB Molecule:itchy homolog e3 ubiquitin protein ligase; PDBTitle: crystal structure of the c2 domain of human itchy homolog2 e3 ubiquitin protein ligase Resolution 1.80 Å

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		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610			.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		Q	V	S	S	L	V	L	H	I	E	E	A	H	K	L	P	V	K	H	.	.	F	T	N	P	Y	C	N	I	Y	L	N	S	V	Q	V	A	K	T	H	A	R	E	G	Q	N	P	V	W	S	E	E	F	V	F	D	D	L	P	P	D	I	N	R	F	E	I	T	L	S	N	K	T	K	K	S	K	D	P	D
Query Conservation																					.	.
Alig confidence															.						.	.																																			.					.
Template Conservation															.																																										.					.
Template Sequence		M	K	S	Q	L	Q	I	T	V	I	S	A	K	.	L	K	E	N	K	W	F	G	P	S	P	Y	V	E	V	T	V	D	G	Q	S	K	K	T	E	K	C	N	N	T	N	S	P	K	W	K	Q	P	L	T	V	.	I	V	T	P	.	V	S	K	L	H	F	R	V	W	S	H	Q	T	L	K	S	D	V	L
Template Known Secondary structure															.																		T	T									S	S		S	S										.				T	.	T												S	S	S
Template Predicted Secondary structure															.																																										.					.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		670	.	.	.	.	.	.	.	.	.	680				.	.	.	.	.	.	.	.	.	690	.	.		.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure													.	.	.													.
Query SS confidence													.	.	.													.
Query Sequence		I	L	F	M	R	C	Q	L	S	R	L	.	.	.	Q	K	G	H	A	T	D	E	W	F	L	L	.	S	S	H	I	P	L	K	G	I	E	P	G	S	L	R	V	R	A
Query Conservation													.	.	.													.
Alig confidence													.	.	.													.
Template Conservation
Template Sequence		L	G	T	A	A	L	D	I	Y	E	T	L	K	S	N	N	M	K	L	E	E	V	V	V	T	L	Q	L	G	G	D	K	E	P	T	E	T	I	G	D	L	S	I	C	L
Template Known Secondary structure																T	T	T			S	S										S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions