Job Description P20936 Confidence 99.50% Date Fri May 25 10:08:08 BST 2012 Rank 188 Aligned Residues 119 % Identity 15% Template c2jqzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase smurf2; PDBTitle: solution structure of the c2 domain of human smurf2 Resolution UNK

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		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610				.	.	.	.	.	.	.	.	.	620	.	.			.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.													.	.																																														.
Query SS confidence																			.	.	.													.	.																																														.
Query Sequence		S	S	L	V	L	H	I	E	E	A	H	K	L	P	V	K	H	.	.	.	F	T	N	P	Y	C	N	I	Y	L	N	S	.	.	V	Q	V	A	K	T	H	A	R	E	G	Q	N	P	V	W	S	E	E	F	V	F	D	D	L	P	P	D	I	N	R	F	E	I	T	L	S	N	K	T	K	K	S	K	D	.
Query Conservation																			.	.	.													.	.																																														.
Alig confidence																			.	.	.													.	.																							.				.																			.
Template Conservation																																																										.				.
Template Sequence		V	K	L	R	L	T	V	L	C	A	K	N	L	V	K	K	D	F	F	R	L	P	D	P	F	A	K	V	V	V	D	G	S	G	Q	C	H	S	T	D	T	V	K	N	T	L	D	P	K	W	N	Q	H	Y	D	L	.	Y	I	G	.	K	S	D	S	V	T	I	S	V	W	N	H	K	K	I	H	K	K	Q
Template Known Secondary structure													S					S	T	T												T	T	T										S	S		S	S										.				.	S	S																B	T
Template Predicted Secondary structure																																																										.				.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
				668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.		.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.		.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure		.	.																			.																			.
Query SS confidence		.	.																			.																			.
Query Sequence		.	.	P	D	I	L	F	M	R	C	Q	L	S	R	L	Q	K	G	H	A	.	T	D	E	W	F	L	L	S	S	H	I	P	L	K	G	I	E	P	.	G	S	L	R	V	R	A	R	Y	S	M
Query Conservation		.	.																			.																			.
Alig confidence		.	.																			.																			.
Template Conservation
Template Sequence		G	A	G	F	L	G	C	V	R	L	L	S	N	A	I	N	R	L	K	D	T	G	Y	Q	R	L	D	L	C	K	L	G	P	N	D	N	D	T	V	R	G	Q	I	V	V	S	L	Q	S	R	D
Template Known Secondary structure		T	B	T																												S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions