Job Description P20936 Confidence 99.64% Date Fri May 25 10:08:08 BST 2012 Rank 130 Aligned Residues 96 % Identity 26% Template c2dtcB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ral guanine nucleotide exchange factor ralgps1a; PDBTitle: crystal structure of ms0666 Resolution 1.70 Å

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		475	.	.	.	.	480	.	.	.	.						.	.	.				.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.									.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.				.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.				.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		I	V	K	K	G	Y	L	L	K	K	.	.	.	.	.	G	K	G	.	.	.	K	R	W	K	N	L	Y	F	I	L	E	G	S	D	A	Q	L	I	Y	F	E	S	E	K	R	.	.	.	.	.	.	.	.	A	T	K	P	K	G	L	I	D	L	S	V	C	S	V	Y	V	V	H	D	S	L	F	G	R	P
Query Conservation												.	.	.	.	.				.	.	.																										.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.				.	.	.														.	.											.	.	.	.	.	.	.	.																						.	.
Template Conservation																																				.	.																																								.	.
Template Sequence		P	T	X	E	G	P	L	R	R	K	T	L	L	K	E	G	R	K	P	A	L	S	S	W	T	R	Y	W	V	V	L	S	G	A	.	.	T	L	L	Y	Y	G	A	K	S	L	R	G	T	D	R	K	H	Y	K	S	T	P	G	K	K	V	S	I	V	G	W	X	V	Q	L	P	D	D	P	.	.	E	H	P
Template Known Secondary structure															B	T	T	B			S													T	T	.	.							B	S	S	S	S			S	G	G	G	B		S	S		S						T	T									T	.	.	T	S	T
Template Predicted Secondary structure																																				.	.																																								.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	F	Q	I	V	V	Q	H	F	S	E	E	H	Y	I	F	Y	F	A	G	E	T	P	E	Q	A	E	D	W	M	K	G	L	Q	A	F	C	N
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		D	I	F	Q	L	N	N	P	D	K	G	.	.	.	N	V	Y	K	F	Q	T	G	S	R	F	H	A	I	L	W	H	K	H	L	D	D	A	C	K
Template Known Secondary structure		T							T	T	S		.	.	.	S							S	S																T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions