Return to main results Retrieve Phyre Job Id

Job DescriptionP20936
Confidence99.79%DateFri May 25 10:08:08 BST 2012
Rank49Aligned Residues108
% Identity13%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   341........350.........360.........370.........380.........390.........400.........410.........420
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  REEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIG
Query Conservation         

 



 





   
     






 
 
  
 
 

      
  
 
           
  
 

 
Alig confidence 



























.


















































Template Conservation   
   
    



 
 
  

 

   .  
 



 
        


       
  
              
 

 
Template Sequence  GPPQDLSVHLWYAGPMERAGAESILANR. SDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLT
Template Known Secondary structure 

SS
GGGSSSB

S

TTTS.
TT

SSTT


TT
TTSSTT

BSS
Template Predicted Secondary structure 


















.



























Template SS confidence 















































































   18.20.........30.........40..... ....50.........60.........70.........80.........90......
 
   421........430.. .......440.........
Predicted Secondary structure 





.....
















Query SS confidence 











. . . . .
















Query Sequence  DIIDHYRKEQIV. . . . . EGYYLKEPVPMQDQEQV
Query Conservation   

  
      .....    
            
Alig confidence 











.....
















Template Conservation 


  
    
      
   
  
       
 
Template Sequence  ELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTI
Template Known Secondary structure  TTS
GGGT
TT





SS





S
Template Predicted Secondary structure 






















Template SS confidence 

































   97..100.........110.........120.........130
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions