Job Description P20936 Confidence 99.46% Date Fri May 25 10:08:08 BST 2012 Rank 195 Aligned Residues 173 % Identity 20% Template c1xa6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:beta2-chimaerin; PDBTitle: crystal structure of the human beta2-chimaerin Resolution 3.20 Å

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		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	E	D	L	V	E	E	V	G	R	E	E	D	P	H	E	G	K	I	W	F	H	G	K	I	S	K	Q	E	A	Y	N	L	L	M	T	V	G	Q	V	C	S	F	L	V	R	P	S	D	N	T	P	G	D	Y	S	L	Y	F	R	T	N	E	N	I	Q	R	F	K	I	C	P	T	P	N	N	Q	F	M
Query Conservation
Alig confidence																																					.	.																																										.	.
Template Conservation																																					.	.																																										.	.
Template Sequence		R	P	K	R	I	I	C	P	R	E	V	E	N	R	P	K	Y	Y	G	R	E	F	H	G	I	I	S	R	E	Q	A	D	E	L	L	.	.	G	G	V	E	G	A	Y	I	L	R	E	S	Q	R	Q	P	G	C	Y	T	L	A	L	R	F	G	N	Q	T	L	N	Y	R	L	F	H	D	G	K	H	F	.	.
Template Known Secondary structure					B					S	S				S	S		S	S		S	S															.	.		S		T	T	B							S	S	S	T	T									T	T										S	S	S			.	.
Template Predicted Secondary structure																																					.	.																																										.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	G	R	Y	Y	N	S	I	G	D	I	I	D	H	Y	R	K	E	Q	I	V	E	G	Y	Y	L	K	E	P	V	P	M	Q	D	Q	E	Q	V	L	N	D	T	V	D	G	K	E	I	Y	N	T	I	R	R	K	T	K	D	A	F	Y	K	N	I	V	K	K	G	Y	L	L	K	K	G	K	G	K	R	W
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	E	K	R	F	E	S	I	H	D	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	G	L	I	T	L	Y	I	E	T	K	A	A	E	Y	I	S	K	M	T	T	N	P	I	Y	E	H	I	G	Y	A	T	L	L	R	Y	E
Template Known Secondary structure			S	S	S					S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S								T	T	S	S			G	G	G	S	S	S	S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.																														.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.		.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		K	N	L	Y	F	I	L	E	G	S	D	A	Q	L	I	Y	F	E	S	E	K	R	A	.	T	K	P	K	G	L	I	D	L	S	V	C	S	V	Y	V	V	H	D	S	L	F	G	R
Query Conservation																									.
Alig confidence																									.																.
Template Conservation																																									.
Template Sequence		K	T	H	N	F	K	V	H	T	F	R	G	P	H	W	C	E	Y	C	A	N	F	M	W	G	L	I	A	Q	G	V	R	C	S	D	C	G	L	N	.	V	H	K	Q	C	S	K	H
Template Known Secondary structure												S	S			B		T	T	T			B			T	T	T	T						S	S	S				.	B		T	G	G	G	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions