Return to main results Retrieve Phyre Job Id

Job DescriptionP20936
Confidence98.70%DateFri May 25 10:08:08 BST 2012
Rank230Aligned Residues109
% Identity20%Templatec1cjyB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (cytosolic phospholipase a2); PDBTitle: human cytosolic phospholipase a2
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   596...600........ .610 .........620. ........630.........640.........650.........660......
Predicted Secondary structure 





...

...




...


























Query SS confidence 












. . .

. . .










. . .












































Query Sequence  LVLHIEEAHKLPV. . . KH. . . FTNPYCNIYLN. . . SVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSK
Query Conservation 
   
 

  
  ...  ...     
 
 
 ...     

  
    
 
 
 
 
  

       
         
Alig confidence 












...

...










...











































.
Template Conservation    
 

           
     
 

 
 



      
 
      
 




 
 
    




    
 
   .
Template Sequence  FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVM.
Template Known Secondary structure  S

S
S



TTSSS





TT
SS

TTS



SSS.
Template Predicted Secondary structure 













































.
Template SS confidence 















































































   1020.........1030.........1040.........1050.........1060.........1070.........1080.........1090........
 
   667..670.........680.........690.........700.........710...
Predicted Secondary structure 
























Query SS confidence 














































Query Sequence  DPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYS
Query Conservation     

 
 
    
        
  
           
 

 
    
Alig confidence 


























........











Template Conservation 

       
      
      
   ........            
Template Sequence  DETLGTATFTVSSMKVGEKKEVPFIFN. . . . . . . . QVTEMVLEMSLE
Template Known Secondary structure 
GGGS
TT
T........TT
Template Predicted Secondary structure 












........


Template SS confidence 














































   10991100.........1110.........1120..... ....1130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions